Gene detail information of Glyur000025s00003295 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007152054.1 | 8.97E-07 | hypothetical protein PHAVU_004G098000g [Phaseolus vulgaris] |
| Swissprot | tr|Q9FS16|EXTN3_ARATH | 1.00E-06 | Extensin-3 (Precursor) |
| trEMBL | tr|A0A072VZJ0|A0A072VZJ0_MEDTR | 2.00E-07 | Uncharacterized protein {ECO:0000313|EMBL:KEH43475.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00025 | 95260 | 95697 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20074.613 |
| SRR1783600 | control | 19974.779 |
| SRR1783602 | moderate drought stress | 22724.844 |
| SRR1811619 | moderate drought stress | 23281.225 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3573.766 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3503.092 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 103.182 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 106.535 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1429.477 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1402.075 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 113.894 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 112.875 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1163.375 |
| SRR2868004 | Drought Stress (root) | 794.080 |
| SRR2967015 | Control (root) | 1151.836 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 268.945 |
| SRR9715740 | Leaf | 22.193 |
| SRR9715741 | Leaf | 52.079 |
| SRR9715739 | Root | 5632.612 |
| SRR9715742 | Root | 6011.594 |
| SRR9715743 | Root | 5003.409 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 88.862 |
| SRR8749028 | MeJA induced 9h | 471.075 |
| SRR8749029 | MeJA induced 9h | 125.962 |
| SRR8749030 | Uninduced | 67.186 |
| SRR8749031 | Uninduced | 19.241 |
| SRR8749032 | Uninduced | 44.675 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2297.570 |
| SRR8400027 | Control - Root | 2603.180 |