Gene detail information of Glyur000025s00003288 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | EEE56835.1 | 1.33E-06 | hypothetical protein OsJ_06442 [Oryza sativa Japonica Group] |
| trEMBL | tr|B9F5A4|B9F5A4_ORYSJ | 5.00E-07 | Putative uncharacterized protein {ECO:0000313|EMBL:EEE56835.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00025 | 47054 | 50793 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.102 |
| SRR1783600 | control | 3.370 |
| SRR1783602 | moderate drought stress | 3.714 |
| SRR1811619 | moderate drought stress | 3.460 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.457 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.152 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.385 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.227 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.661 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.263 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.880 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.709 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.029 |
| SRR2868004 | Drought Stress (root) | 0.710 |
| SRR2967015 | Control (root) | 1.687 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.310 |
| SRR9715740 | Leaf | 0.824 |
| SRR9715741 | Leaf | 2.224 |
| SRR9715739 | Root | 0.041 |
| SRR9715742 | Root | 0.043 |
| SRR9715743 | Root | 0.078 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.023 |
| SRR8749028 | MeJA induced 9h | 0.004 |
| SRR8749029 | MeJA induced 9h | 0.057 |
| SRR8749030 | Uninduced | 0.076 |
| SRR8749031 | Uninduced | 0.019 |
| SRR8749032 | Uninduced | 0.021 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.019 |
| SRR8400027 | Control - Root | 0.007 |