Gene detail

Gene detail information of Glyur000024s00006655

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT5G66020.1	Phosphoinositide phosphatase family protein
NR	XP_004512259.1	PREDICTED: phosphoinositide phosphatase SAC7-like isoform X1 [Cicer arietinum]
Swissprot	tr\|Q7X911\|SAC6_ARATH	Phosphoinositide phosphatase SAC6
trEMBL	tr\|G7K028\|G7K028_MEDTR	Phosphoinositide phosphatase SAC1 {ECO:0000313\|EMBL:AES95295.2}

Sequence

Transcript Sequence

>Glyur000024s00006655.1
ATGTTCGCCAAACACAGAGACGCCACCGCCGGAGGCAGGGAGGACNAAAACAGGGCATTCTCCGCTGAAGATCTCCCACCGCTGCAGCAACCGTTGTCGCCGGAAAGACAGCCACTNCGCACAGGAGCCGCTGTCGTGGTCTTCTCCGTCACAATGGGAATTCGGATAATGATGGAGAGGGCAGATTCTGGACAGAAGCTATACACGCGTATGCGGCTTTGGGAATTTCCTGATCAGTATGTGATTGAGCCAACGGATGGATCTTCTGGTTCTTCTCTTGCAGTTAGTCGAAAAGATGGCTGCATGAAACTCATTGATGAAGCTCCGGAATGCAGCACCCTTCGAGTTCCTAGGATTTTCACAATTTTCGGTGTGGTTGGGATGTTAAGGCTTTTGGCTGGATCATATTTGCTGGTTATAACTGAGCGTGAATGTGTTGGATCTTACTTGGGGCATCCAATTTTTAAAGTTTCATCCATGAAGGTTTTTCCATGTGATTATTCTCTTAATAATACCACTGCTGAACAGAAAAAGACAGAGATGGAATTTTCTGCACTGTTAAATGTTGCTGAGAAGACTTCTGGTCTTTTCTTCTCATACGATGCTAATTTAACTTTGAGTGTGCAGCGACTAAATGACCTAGGTGATGAGTCTAGATTGCTTCCTCTTTGGAGACAGGCAGAGCCTCGGTTTCTGTGGAATAATTATATGTTGGAGGTGCTCATAGATAACAAGCTTGATCCATACTTACTCCCTGTAGTCCAAGGCAGCTTTCATTTTTTTCAAGCAGCCATCGGGAAAGATATTATTGACATCACTTTAATTGCGAGGAGATGCACAAGAAGAAATGGAACTCGGATGTGGAGAAGAGGAGCTGATCCTGATGGATATGTTGCTAATTTTGTGGAAACTGAGCAAATTATGCAGTTCAATGGGTACACAGCATCATTTATTCAGGTTCGCGGTTCAATTCCACTGCTCTGGGAGCAAATTGTTGACTTAACATATAAACCAAAGTTTGAAATATTGAAACTTGAGGAAGCTCCTCGAGTCCTAGAGCGGCATTTCTTAGATTTAAGAAAAAAATATGGGGCTGTGTTAGCTGTTGATCTTGTCAACAAGCATGGAGGAGAGGGGCGGCTCTGTGAAAAATTTGGAAGCACAATGCAGCACGTGGCTAGTGATGATGTCAAATATTTGCACTTTGATTTCCATCACATCTGCGGGCATGTTCATTTCGAACGTCTCTCAATCCTTTACGATCAGATTTCAGATTTTCTTGAGAGAAATGGATATCTTTTATTGAATGAAAAGGGAGATAAAATGAAGGAGCAACTCGGGGTTGTTAGGACAAATTGTATTGATTGTCTAGACCGTACAAATGTTACACAGAGCATGATTGGCCGAAATATGCTGGAATACCAGCTTAGAAGGCTTGGTGTCTTTGGTGCAGAAGAAACTATTTGTTCTCATCCAAATCTGGATGAAAAATTTAAGATCTTGTGGGCTAATCATGGAGATGATATAAGTATTCAATATTCAGGCACTCCTGCTCTAAAAGGAGATTTTGTCCGATTTGGGCACCGCACAATTCAGGGGATACTAACAGATGGTTGGAATGCTCTTCTACGCTATTATTTGAATAACTTCTGTGATGGAACAAAGCAGGATGCAATTGATCTCCTACAAGGACATTATATAGTTTCTGTCAACCGAGATGTGGTTCCTGCTTCTCAGAATCGAGGCCTTGAAGCTATTGCTTCATTTCCTCTGGCTTTGGGTCTGGTTTTGACTGGGTTCCTTTTCGCAACCATGTCATTGAGGCAAGTTAGATATGATTTTCGGCACTTCTTCTTTTCGTTAATGTGGGCAAGCATTAGCGTTGGTATAGCAGCATTTGCGAGGGCCAATGGCCGGCTTTTCTGCAACAGACCTCGCCTACACAAACCCCGGTGTTGATGTCTATTAGATTATCACTTTCGGCAATTAAAAATTTTCCCCAGAAGTTTCCAGCTTCTGCAACAGGTGTCACCTTCCGGTCGGTGCCTTAGTTCTACATTAGACCACTTCAACGTATTTAATGTTTGCATAAGGCTCCTAGCATACTTGTTACTAAATTTATTCATTCATACTAATTTTATAGTCATTATAGCTTCCAAATTGATTCCTTCTCATCTTAGTGATTGGCGTTGTCGGCAGTTCTTGCTCCGCCTATTTCTCTTTGTATATGCGGGTTCTTGGAAATCCCCTATAGTTGATTCTTTTGTGTGCATTTACAAGAATTCATTATTCTTGCAATAGAATTAACCTCTTAGATTTTCATTCCAGTCTGTTACTGCCACGGAGATGGCTTTATTTTACACTTTTATGTTCTGTTCCTTTTGTTTTGTTAAGTAAAAGCAGTTGC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00024	521789	533524	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0042578 phosphoric ester hydrolase activity

GO:0052866 phosphatidylinositol phosphate phosphatase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000024s00006655.1	PF02383.13	Syja_N	122	414	4.40E-85

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.329
SRR1783600	control	1.362
SRR1783602	moderate drought stress	1.611
SRR1811619	moderate drought stress	1.659

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.511
DRR006520	Root Summer glycyrrhizin high producing strain	2.582
DRR006521	Root Winter glycyrrhizin high producing strain	14.032
DRR006522	Root Winter glycyrrhizin high producing strain	14.023
DRR006523	Root Summer glycyrrhizin low producing strain	3.837
DRR006524	Root Summer glycyrrhizin low producing strain	3.731
DRR006525	Leaf Summer glycyrrhizin high producing strain	5.218
DRR006526	Leaf Summer glycyrrhizin high producing strain	5.149

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	6.283
SRR2868004	Drought Stress (root)	8.787
SRR2967015	Control (root)	7.795

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	8.943
SRR9715740	Leaf	10.175
SRR9715741	Leaf	10.738
SRR9715739	Root	2.298
SRR9715742	Root	2.506
SRR9715743	Root	3.016

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	7.520
SRR8749028	MeJA induced 9h	13.112
SRR8749029	MeJA induced 9h	6.566
SRR8749030	Uninduced	10.355
SRR8749031	Uninduced	5.071
SRR8749032	Uninduced	5.656

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	6.149
SRR8400027	Control - Root	6.090