Gene detail information of Glyur000024s00006642 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G57950.1 | 5.00E-20 | |
| NR | XP_007162312.1 | 1.34E-57 | hypothetical protein PHAVU_001G141500g [Phaseolus vulgaris] |
| trEMBL | tr|V7CZH4|V7CZH4_PHAVU | 5.00E-58 | Uncharacterized protein {ECO:0000313|EMBL:ESW34306.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00024 | 445808 | 446395 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000024s00006642.1 | PF05553.6 | DUF761 | 159 | 194 | 1.20E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 52.252 |
| SRR1783600 | control | 52.719 |
| SRR1783602 | moderate drought stress | 116.852 |
| SRR1811619 | moderate drought stress | 116.232 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.428 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.805 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.297 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.158 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 33.879 |
| SRR2868004 | Drought Stress (root) | 65.601 |
| SRR2967015 | Control (root) | 161.182 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.101 |
| SRR9715740 | Leaf | 7.738 |
| SRR9715741 | Leaf | 22.805 |
| SRR9715739 | Root | 16.382 |
| SRR9715742 | Root | 4.049 |
| SRR9715743 | Root | 4.583 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.237 |
| SRR8749028 | MeJA induced 9h | 2.262 |
| SRR8749029 | MeJA induced 9h | 1.296 |
| SRR8749030 | Uninduced | 0.080 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.036 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.438 |
| SRR8400027 | Control - Root | 24.149 |