Gene detail information of Glyur000024s00006634 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G58000.1 | 2.00E-15 | VQ motif-containing protein |
| NR | XP_003533920.1 | 7.12E-50 | PREDICTED: uncharacterized protein LOC100780372 [Glycine max] |
| trEMBL | tr|K7LD73|K7LD73_SOYBN | 3.00E-50 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G17151.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00024 | 385718 | 386308 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000024s00006634.1 | PF05678.9 | VQ | 42 | 70 | 3.70E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.427 |
| SRR1783600 | control | 3.264 |
| SRR1783602 | moderate drought stress | 2.203 |
| SRR1811619 | moderate drought stress | 2.261 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.374 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.179 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 33.057 |
| SRR2868004 | Drought Stress (root) | 41.825 |
| SRR2967015 | Control (root) | 57.665 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.113 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.108 |
| SRR9715739 | Root | 0.936 |
| SRR9715742 | Root | 2.415 |
| SRR9715743 | Root | 1.250 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.292 |
| SRR8749028 | MeJA induced 9h | 0.460 |
| SRR8749029 | MeJA induced 9h | 0.520 |
| SRR8749030 | Uninduced | 0.419 |
| SRR8749031 | Uninduced | 0.239 |
| SRR8749032 | Uninduced | 0.205 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.370 |
| SRR8400027 | Control - Root | 10.320 |