Gene detail

Gene detail information of Glyur000024s00006616.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G06720.1	3.00E-112	peroxidase 2
NR	XP_003535116.1	0	PREDICTED: peroxidase 53-like [Glycine max]
Swissprot	tr\|Q9LEH3\|PER15_IPOBA	7.00E-160	Peroxidase 15 {ECO:0000303\|PubMed:17936696} (Precursor)
trEMBL	tr\|I1L2L1\|I1L2L1_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA09G16810.1}

Sequence

Transcript Sequence

>Glyur000024s00006616.1
CCCAGACATGAATCACAGAACAAGGCTATACCGTTGGGAAAGAAGACACAAAAAATTTAACCATGGTTTCTACTTCAGTGCTGGCTTNCATTTTCCTAATGCTATTCCATCTTCTTCCTTCAATTAATGGGCAATTAAGTTCAACCTTCTATTCTAGTACATGCTCCAATGTGACATCCATCGTGAGGAATGCTGTTCAACAGGCTCTGCAATCTGATTCCCGTATTGGCGCAAGCTTAACTCGCCTCCACTTTCATGATTGCTTTGTCAATAGCGAGAAAAATGCAGCTCCTAACGTTAATTCCATTCGGGGATTTGATGTCGTTGACAACATCAAAAGCTCTCTTGAAAATTCATGCCCTGGTGTCGTGTCCTGTGCTGACATTCTTGCCCTTGCAGCTGAATCTTCCGTGTCCTTGTCAGGGGGTCCTTCGTGGAACGTACTACTCGGAAGAAGAGACGGTCAAAGCGCGAACCAAGGTGGTGCCAACAGCTCTATTCCCTCTCCATTTGAGAGCCTAGCCAACGTTACTTCCAAATTCTCTGCTGTTGGCCTTGACACCAATGATCTCGTTGCATTGTCAGGTGCACACACATTTGGTCGTGCCCAATGCCAATTCTTCTCCCAAAGGTTGTTCAACTTCAGCGGCACTGGAAGCCCTGACCCAACGCTGAACTCGACCTATTTGGCTACCCTACAGCAGAATTGNCCACAAAATGGCAATGGGTCTACTCTGAACAACCTTGACCCTTCATCTTCAGACACTTTCGACAACAACTACTTCAGCAACCTTCTCACCAACCAGGGTCTTCTCCAAACGGACCAAGAGCTTTTCTCCACCAATGGCTCTGCCACTGTCTCCATTGTTAACAACTTCGCCAACAATCAAACGGCGTTCTTCCAACAATTCGCTCAGTCAATGATTAATATGGGTAATATTAACCCCTTAACGGGAAGTCAGGGAGAAATCAGAACCGATTGTAAGAAAGTCAATGGAAGTTGAAAACAGAGAGAGAGGCAAAGAAAGGGAAGAAAAGATAGCATTGCCACATTATTTCTTGAATCTTGATACAGTCAATCTGTTTTTATCAATGTAAACGATAGTTTTTTTTTTTTTTTGCATTTGTGTAAGTGAGTGGCACTAATAATGTATTCCATATGGACTACATATTGGTCAAGAAATTAACATGCCTTCTCATCCTTGTATTCTTCGAAGGAAAATATTTTGTATACACTCCAATGTGTGTAGAGAGAGAAATGATAAAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00024	279974	282074	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00430	E1.11.1.7	EC:1.11.1.7	Phenylpropanoid biosynthesis	map00940

Gene Ontology

biological_process

GO:0006979 response to oxidative stress

GO:0055114 oxidation-reduction process

molecular_function

GO:0004601 peroxidase activity

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000024s00006616.1	PF00141.18	peroxidase	41	275	1.00E-65

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	31.570
SRR1783600	control	31.388
SRR1783602	moderate drought stress	5.696
SRR1811619	moderate drought stress	5.764

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	12.879
DRR006520	Root Summer glycyrrhizin high producing strain	12.762
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	17.638
DRR006524	Root Summer glycyrrhizin low producing strain	18.624
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.561
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.481

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	14.910
SRR2868004	Drought Stress (root)	11.244
SRR2967015	Control (root)	12.923

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	9.988
SRR9715740	Leaf	0.416
SRR9715741	Leaf	4.610
SRR9715739	Root	1.548
SRR9715742	Root	7.135
SRR9715743	Root	6.336

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.744
SRR8749028	MeJA induced 9h	4.137
SRR8749029	MeJA induced 9h	6.632
SRR8749030	Uninduced	22.035
SRR8749031	Uninduced	1.748
SRR8749032	Uninduced	1.063

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	8.579
SRR8400027	Control - Root	13.895