Gene detail

Gene detail information of Glyur000024s00006608

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G12050.1	9.00E-101	Aha1 domain-containing protein
NR	XP_004497884.1	3.06E-148	PREDICTED: activator of 90 kDa heat shock protein ATPase homolog [Cicer arietinum]
COG	YP_003758137.1	1.00E-06	Activator of Hsp90 ATPase 1 family protein [Dehalogenimonas lykanthroporepellens BL-DC-9]
trEMBL	tr\|A0A072TGU9\|A0A072TGU9_MEDTR	2.00E-139	Activator of 90 kDa heat shock ATPase-like protein {ECO:0000313\|EMBL:KEH16602.1}

Sequence

Transcript Sequence

>Glyur000024s00006608.1
ATGTATGTTCCCAATTCGATTTTTTTTTACGGTGAGGGCGACAAGCGTTGGATCGTGGAGGTTTTTTTTGACGGCACCAACGTCCACAACTGGCACTGGGCCGAGACCAACTGTCTAGAATGGTCTAGAACCTTCTTCAACAACCTCCTCAACAACCTCAAACTCCTTGACGGCGGCGACATCCACCTCGCCGTCAAAAAGGTTGAGAAGCTCGACGGCGAGGCCTACGTCAACGTCCGAAAGGGCAAGGTAATTCCCGGATACGAGATCAGCGTCTCAATCTCGTGGGAGGGCGAGGCCAGAGACTCCGACGGTAANATCCTTCACAAGGTCAACGGCACCGTCGAGATCCCCTACATTTCCGACGAGAACGCCGACGAGGATCCCGAGGTTAGGGTTACGCTCAAAAACGACGAGGGACCGTTGGGGAAGAAGCTGAAGGAGGCGATGGTTGCAAAGGGGAAGCCGTTGNTCCTTGAGATTTTTTTTGTTTGGGTTCAGAGCATGGCCAAGGGTGGGCCCGTTTTTTTTGAGCTCGAGACTAAGAAGGTGCCGCCGCGGAAGATTTTTTTTGTGGTGGATGTGGCGGCGACGAAGAAGGAAGGGGTTTTTTTTGCGAAGAAGAAGGAGAAGGAGAAGGGGAAGGAGGTTTTTTTTACGATTAGCTTGACGGAGAGGTTTAATTGCAGGGTTTTTTTTTTGTTTGAGATATTGATGGATGAGAATAGGTGGATTTTTTTTACGCAGAGCAATGCGAGGATTAGTAAGGACGTTGTTTTTTTTTTTAGCATCTTTGATGGGTCTGTCACTGGAACCAATTTGGAGTTGCAGGAAGGGAAGCTGATTGTGCAGAGATGGATTTTTTTTAGCTGGCCTGATGGGATGCAATCAATGGAGCCTGAATCTGGAGTTACAGTTGTCAAGCTTACACACACTGATGTGCCGGAAGAAGACAGAGTTGAGTTTCAAGAGGTAGCTTCACTTCTCCCAACTTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00024	232060	236523	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0001671 ATPase activator activity

GO:0051087 chaperone binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000024s00006608.1	PF09229.6	Aha1_N	35	169	1.00E-30

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	7.335
SRR1783600	control	7.111
SRR1783602	moderate drought stress	7.087
SRR1811619	moderate drought stress	6.568

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	14.991
DRR006520	Root Summer glycyrrhizin high producing strain	14.586
DRR006521	Root Winter glycyrrhizin high producing strain	2.552
DRR006522	Root Winter glycyrrhizin high producing strain	1.832
DRR006523	Root Summer glycyrrhizin low producing strain	8.206
DRR006524	Root Summer glycyrrhizin low producing strain	8.215
DRR006525	Leaf Summer glycyrrhizin high producing strain	7.767
DRR006526	Leaf Summer glycyrrhizin high producing strain	9.761

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	24.430
SRR2868004	Drought Stress (root)	21.287
SRR2967015	Control (root)	19.364

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	20.862
SRR9715740	Leaf	14.471
SRR9715741	Leaf	21.011
SRR9715739	Root	16.641
SRR9715742	Root	18.144
SRR9715743	Root	16.793

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	17.009
SRR8749028	MeJA induced 9h	11.285
SRR8749029	MeJA induced 9h	7.318
SRR8749030	Uninduced	1.563
SRR8749031	Uninduced	0.115
SRR8749032	Uninduced	3.271

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	15.621
SRR8400027	Control - Root	15.456