Gene detail information of Glyur000024s00006583 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G31200.1 | 2.00E-08 | phloem protein 2-A9 |
| NR | NP_001265911.1 | 1.88E-20 | protein PHLOEM PROTEIN 2-LIKE A9-like [Cicer arietinum] |
| Swissprot | tr|Q9SA16|P2A09_ARATH | 2.00E-10 | Protein PHLOEM PROTEIN 2-LIKE A9 |
| trEMBL | tr|Q9M444|Q9M444_CICAR | 7.00E-21 | Lectin-like protein {ECO:0000313|EMBL:CAB71030.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00024 | 23108 | 24499 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.253 |
| SRR1783600 | control | 14.742 |
| SRR1783602 | moderate drought stress | 12.568 |
| SRR1811619 | moderate drought stress | 12.496 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 83.920 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 81.430 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.071 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.201 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 145.925 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 155.853 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 125.032 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 127.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 187.348 |
| SRR2868004 | Drought Stress (root) | 157.954 |
| SRR2967015 | Control (root) | 112.245 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 210.205 |
| SRR9715740 | Leaf | 167.101 |
| SRR9715741 | Leaf | 210.263 |
| SRR9715739 | Root | 10.965 |
| SRR9715742 | Root | 107.866 |
| SRR9715743 | Root | 87.875 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 168.794 |
| SRR8749028 | MeJA induced 9h | 209.154 |
| SRR8749029 | MeJA induced 9h | 234.703 |
| SRR8749030 | Uninduced | 851.956 |
| SRR8749031 | Uninduced | 2130.050 |
| SRR8749032 | Uninduced | 735.704 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 80.118 |
| SRR8400027 | Control - Root | 70.385 |