Gene detail

Gene detail information of Glyur000023s00004945

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G39980.1	0	HXXXD-type acyl-transferase family protein
NR	XP_004490956.1	0	PREDICTED: uncharacterized acetyltransferase At3g50280-like [Cicer arietinum]
Swissprot	tr\|Q9FF86\|DCR_ARATH	1.00E-59	BAHD acyltransferase DCR
trEMBL	tr\|I1JI60\|I1JI60_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA02G42180.1}

Sequence

Transcript Sequence

>Glyur000023s00004945.1
ATGCCTTCTTCAGCGCCCACCTTGCTCTCAAAATGCACCGTCTTCCCAGACCAAAAATCAACCCTGGGAAGCCTTAAACTCTCCGTTTCAGACCTTCCCATGCTTTCTTGCCACTACATCCAAAAGGGATGTCTCTTCACCGAACCTTCCATTCCCTTCCACACACTCATCCCTCTCCTCAAGTCTTCACTCTCTCGCACTCTCTCCCTCTTTCCCCCTCTCGCCGGCCGTTTCGTAACATACTCCGACGGTTACGTCTACCTTAACTGTAACGACGCCGGCGTCGATTTCCTCCACGCCATTGCCACCGGACTCTACATCCGCGACCTCTTGTCCACCACCGATGTCCACGAATCCTTCAAGGAGTTCTTCGCCTTCGATAGGAAAGTCAGTTACAGTGGCCATTTCTCGCCCATTTTGGCCGTTCAGGTAACTGAACTCGCNGACGGCGTCTTCATTGGCTGCGCCGTTAATCATGCCGTCACCGACGGTACCTCCTTCTGGAACTTCTTCAACACGTTCGCGCAGGTCTGCAGGGGAGTTAACAAGTGTTTCCGCAACGTCCCGAACTTCCGCCGCGAGTCCGTCCTCATCTCCGACGCCGTTCTCCGGCTACCNGAGGGCGGTCCGGAAGTTACGTTCAACGCCGACGCGCCGATTCGAGAGAGGATCTTCAGCTTCAGCCGCGAATCTGTTCAGAAATTGAAGGCTAAANCAAATAACTGGCGCTGGACAGAGGCAAATTATAACANCGCCGTGGAGTTCATGCTTAAGCAAAGCAACGATCACCACCACAACAACCAGAAGGAGAACAACGGCAAGGTCGCGACGATCCTCGAGAATTGGTTCAAGAGCGCGGTTAATTCGAATTCGAAACCGCAATTAACGGTTACGGACACCGAAACGGTTGAGATTTCGTCGTTTCAGTCGGTGTGCGCGCTGCTGTGGCGAGCCGTGACTCGCGCGAGGAAGTTGCCGGCGTCGAAAACGACCACGTTTAGAATGGCGGTGAACTGTCGTCATCGGATAGAACCGAAATTGGAACCGTACTACTTCGGGAACGCGATTCAGAGCGTGCCGACGTACGCTTCCGCAGGCNACGTGTTGTCCAGGGATCTACGGTGGTGCGCGGAGCAGCTGAACAAGAACGTGAAGGCACACGACGACGCTATGGTGCGCCGCATCGTAGAGGATTGGGAGAGGAATCCGAGGTGCTTCCCGTTGGGGAACCCCGACGGTGCTTCCATCACCATGGGAAGTTCACCGAGGTTCCCAATGTATGACAACGATTTTGGGTGTGGGAGACCGATGGCGGTGAGGAGTGGAAAGGCGAACAAATTCGACGGCAAGATCTCGGCGTTTCCCGGAAGGGACGGCGCCGGCACCGTTGATTTAGAGGTTGTTTTGGCGCCCGAAACTATGGCGGGGCTTGAGTCTGATCCTGAGTTCATGCTATACGCGTCGAGGCAGTTATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00023	555077	556552	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000023s00004945.1	PF02458.10	Transferase	8	484	4.20E-109

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.278
SRR1783600	control	4.244
SRR1783602	moderate drought stress	17.231
SRR1811619	moderate drought stress	16.462

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.441
DRR006520	Root Summer glycyrrhizin high producing strain	0.469
DRR006521	Root Winter glycyrrhizin high producing strain	26.870
DRR006522	Root Winter glycyrrhizin high producing strain	25.051
DRR006523	Root Summer glycyrrhizin low producing strain	2.731
DRR006524	Root Summer glycyrrhizin low producing strain	2.795
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.449
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.337

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	20.691
SRR2868004	Drought Stress (root)	22.385
SRR2967015	Control (root)	20.935

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.426
SRR9715740	Leaf	0.608
SRR9715741	Leaf	1.028
SRR9715739	Root	36.222
SRR9715742	Root	22.740
SRR9715743	Root	23.566

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.055
SRR8749028	MeJA induced 9h	3.365
SRR8749029	MeJA induced 9h	0.784
SRR8749030	Uninduced	19.442
SRR8749031	Uninduced	9.484
SRR8749032	Uninduced	18.715

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	127.775
SRR8400027	Control - Root	142.984