Gene detail information of Glyur000023s00004941 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G11260.1 | 5.00E-45 | WUSCHEL related homeobox 5 |
| NR | XP_003616581.1 | 2.22E-86 | WUSCHEL-related homeobox [Medicago truncatula] |
| Swissprot | tr|Q8H1D2|WOX5_ARATH | 3.00E-58 | WUSCHEL-related homeobox 5 |
| trEMBL | tr|G7KBY3|G7KBY3_MEDTR | 8.00E-87 | Wuschel-related homeobox protein {ECO:0000313|EMBL:AES99539.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00023 | 539362 | 540406 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | HB |
| EAR motif-containing Proteins | HB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000023s00004941.1 | PF00046.24 | Homeobox | 36 | 97 | 2.80E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.072 |
| SRR1783600 | control | 0.068 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.211 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.218 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.836 |
| SRR2868004 | Drought Stress (root) | 1.239 |
| SRR2967015 | Control (root) | 0.607 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.143 |
| SRR9715742 | Root | 0.094 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 61.379 |
| SRR8749028 | MeJA induced 9h | 52.591 |
| SRR8749029 | MeJA induced 9h | 12.974 |
| SRR8749030 | Uninduced | 4.614 |
| SRR8749031 | Uninduced | 0.333 |
| SRR8749032 | Uninduced | 1.365 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.377 |
| SRR8400027 | Control - Root | 0.040 |