Gene detail information of Glyur000023s00004930 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G38120.1 | 6.00E-61 | Transmembrane amino acid transporter family protein |
| NR | XP_007141783.1 | 9.17E-94 | hypothetical protein PHAVU_008G225300g [Phaseolus vulgaris] |
| Swissprot | tr|Q9FEL8|LAX1_MEDTR | 2.00E-91 | Auxin transporter-like protein 1 |
| trEMBL | tr|V7B7B9|V7B7B9_PHAVU | 3.00E-94 | Uncharacterized protein {ECO:0000313|EMBL:ESW13777.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00023 | 444013 | 449835 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000023s00004930.1 | PF01490.13 | Aa_trans | 46 | 161 | 1.90E-18 |
| Glyur000023s00004930.2 | PF01490.13 | Aa_trans | 46 | 161 | 1.90E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.840 |
| SRR1783600 | control | 21.205 |
| SRR1783602 | moderate drought stress | 26.773 |
| SRR1811619 | moderate drought stress | 26.619 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.217 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.680 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.784 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.643 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 28.413 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 28.737 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.979 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.845 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 72.037 |
| SRR2868004 | Drought Stress (root) | 60.128 |
| SRR2967015 | Control (root) | 85.985 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.414 |
| SRR9715740 | Leaf | 12.313 |
| SRR9715741 | Leaf | 13.579 |
| SRR9715739 | Root | 49.286 |
| SRR9715742 | Root | 68.957 |
| SRR9715743 | Root | 62.137 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 28.755 |
| SRR8749028 | MeJA induced 9h | 14.719 |
| SRR8749029 | MeJA induced 9h | 6.892 |
| SRR8749030 | Uninduced | 3.821 |
| SRR8749031 | Uninduced | 0.364 |
| SRR8749032 | Uninduced | 4.758 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 78.281 |
| SRR8400027 | Control - Root | 65.234 |