Gene detail information of Glyur000023s00004925 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G40087.1 | 3.00E-04 | Plant transposase (Ptta/En/Spm family) |
| NR | XP_006574073.1 | 3.77E-23 | PREDICTED: uncharacterized protein LOC102666055 [Glycine max] |
| trEMBL | tr|G7LB25|G7LB25_MEDTR | 1.00E-19 | Uncharacterized protein {ECO:0000313|EMBL:AET02890.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00023 | 390326 | 400265 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.591 |
| SRR1783600 | control | 4.925 |
| SRR1783602 | moderate drought stress | 3.126 |
| SRR1811619 | moderate drought stress | 3.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.687 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.757 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.251 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.084 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.032 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.381 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.626 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.085 |
| SRR2868004 | Drought Stress (root) | 0.042 |
| SRR2967015 | Control (root) | 0.053 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.696 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 9.493 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 5.920 |
| SRR9715743 | Root | 5.156 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.146 |
| SRR8749028 | MeJA induced 9h | 0.041 |
| SRR8749029 | MeJA induced 9h | 0.071 |
| SRR8749030 | Uninduced | 0.012 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.464 |
| SRR8400027 | Control - Root | 10.728 |