Gene detail information of Glyur000023s00004917 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G40110.1 | 1.00E-25 | Yippee family putative zinc-binding protein |
| NR | XP_004490983.1 | 1.09E-39 | PREDICTED: protein yippee-like isoform X3 [Cicer arietinum] |
| Swissprot | tr|P59234|YIPL_SOLTU | 5.00E-33 | Protein yippee-like |
| trEMBL | tr|A0A067FZX9|A0A067FZX9_CITSI | 3.00E-38 | Protein yippee-like {ECO:0000256|RuleBase:RU110713} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00023 | 344010 | 347037 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000023s00004917.1 | PF03226.9 | Yippee-Mis18 | 10 | 56 | 4.90E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 41.168 |
| SRR1783600 | control | 41.622 |
| SRR1783602 | moderate drought stress | 34.539 |
| SRR1811619 | moderate drought stress | 33.597 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 38.733 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 39.348 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.650 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.629 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.516 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.583 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 24.019 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 25.271 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 118.828 |
| SRR2868004 | Drought Stress (root) | 148.018 |
| SRR2967015 | Control (root) | 160.852 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 47.527 |
| SRR9715740 | Leaf | 33.392 |
| SRR9715741 | Leaf | 48.411 |
| SRR9715739 | Root | 17.080 |
| SRR9715742 | Root | 20.364 |
| SRR9715743 | Root | 18.207 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 57.700 |
| SRR8749028 | MeJA induced 9h | 28.912 |
| SRR8749029 | MeJA induced 9h | 72.484 |
| SRR8749030 | Uninduced | 30.897 |
| SRR8749031 | Uninduced | 52.529 |
| SRR8749032 | Uninduced | 43.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 109.307 |
| SRR8400027 | Control - Root | 122.330 |