Gene detail

Gene detail information of Glyur000023s00004874

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G40270.1	2.00E-121	Protein kinase family protein
NR	XP_003544063.1	0	PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1-like [Glycine max]
COG	YP_007319008.1	7.00E-10	hypothetical protein FAES_0403 [Fibrella aestuarina BUZ 2]
Swissprot	tr\|C0LGQ4\|MRH1_ARATH	5.00E-169	Probable LRR receptor-like serine/threonine-protein kinase MRH1 (Precursor)
trEMBL	tr\|I1M7R5\|I1M7R5_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA14G06230.1}

Sequence

Transcript Sequence

>Glyur000023s00004874.1
CAAACACTATGTTATCGTAGACTGAACTCCCCTCAGTGACGCAATGGGATTCCCCCGTCAAACACGGCTTAGAGGATAGAGGATAAAATACAAATGGAGCAAAACCAAGGATACAAATTGTGAGCGAAACTCGTCTTAAAGTCTTTCGGGGTCCATAACACCAAACTCACATGCAAGTGTTAGAAACATGGTTTAGACATAATAACCCTTTTTGCTCCTTCCACTCCATTTTCAGGTTGCCCTTTTGTTTTCTTTTTCCTTCGATAAGATTTTANGCCATGTTTCTCTTAAAAACATAATTGGCTTAGACAAAACAANAAGAAGAATGAGCAAGAACATGAATCTCACTCGGCTCAGGGATCNTTCTGGAGCTTTGTGCTCTGTGGCAGTGTGCTTCTTGTTTCTGAACTTGGGTTTGTGCTGTTCTTTAAATGAAGAAGGTAACGCTCTTTTGAAGTTGAAGAAGAGAATAACAAGTGACCCTTTTGGTGCTTTGACCAATTGGATTGATGATGAAGCAGCTGTTGACCCTTGTAACTGGTTTGGAGTTGAGTGTTCAGATAGAAGAAGAGTNGTGGTCTTGAATTTGAAAGANCTTTGCCTTGGAGGAACTCTGGCACCAGAGCTTGTGAACCTTATTCACATAAAATCTATTATTTTGCGGAACAACTCCTTCTCTGGGACCATCCCTGAAGAAATTGTAGATTTGAAAGAGTTGGAGATTTTAGATTTGGGATACAACAACTTCAGTGGTCATTTTCCTGCTAATTTTGGGAGTAATATCTCACTAGCAATCCTTTTGCTGGACAACAATGAGCTCCTTATTGGTTTCGCACCTGAAATCATTGAACTGAAGNCGCTTTCTGAGTGTCAAATAGATGAAAACCAGCTAATCAATGCAGCTAAGATGCCAGCTTGTTCAGAAAGATCCATCNCATGGCATGTTCGTCAAAATAAAGCTACTAGGAGCCTGCTGGAAAATCATAAACCACAGCATAGTGGTTATCATTTTCAACACCATCGTAATAGTACAGCTAATAAACACCATCATAATCGTACAGCTAATTCACCTTTCTATAGATCTTCATCTTCTCCTTCAGGTTCCCCACCGGCCTCAGCAGCACCACCAGTGCCAAAGCTAGCTTCTAATCAAAGTGCTTTTGATTCTTCTCCTCCCCTATCTACACCAGGCTCTGAAGCAAAATCTAAAAGAACCTCATCGAAGAAGAACCGAGTCCCTATTTTGGCTGGCGTTATAGGTGGTGCTGTTTTTCTTCTTATTTCAAGCATTGGTATATATCTTTGTAAAACCAACAAGGTAGCAAATGTCAGACCTTGGGCTACCGGAATAAGTGGACAGCTTCAGAAGGCATTTGTGACTGGTGTGCCNAAGCTAAAGAGATCAGATCTTGAAGCAGCATGTGAAGATTTTAGTAATGTAATTGGTAATTTACCTATTGGTACATTGTACAAAGGAACTTTGTCTAGTGGTGTTGAAATAGCTGTAGCTTCTGTTTCGGTGACATCATCCAAGAGTTGGTCAAAGACTTTAGAAGCTCAATTTAGGAAGAAGGTAGATACATTATCAAAAGTGAACCACAAGAATTTTGTCAATCTTATTGGATATTGTGAAGAAAAGGAGCCTTTCACCAGAATGNTGGTTTTTGAATATGCCCCGAACGGATCACTATTTGAGCATTTACACATTAAAGAAGCGGAGCACTTGGATTGGGGAACAAGACTTAGAGTTGCAATGGGTATGGCTTATTGCCTGCAACATCTGCATCAGTTGGACCCTCCTATATCCCCTGTCAACCTGAATTCTTCATCCGTCCACCTAACCGATGACTATGCCGCCAAGATCTCAGATTTGAGTTTCTCGAATGAAACNGCCTCAGCTGAAACAAAAGCTGGTGGTAGAAATAGAAAACACATTGACGTGCCAATTCCATCAGCAAGTCCAGCAAGTAATGTTTATAGCTTTGGTGTTTTATTATTCGAAATGGTTACGGGCCGTCTCCCTTATTCGGTGGACAATAGCTCATCACTTGAAAACTGGGCATCACATTATCTTAAAGGGGACCAACCCCTCAGAGAAATGGTGGATCCAATTCTCACATCTTACCAAGAAGATCAGCTGGAACAAGTTGCTGCATTGATAAAGTCTTGTGTCCACCCGGATTCAGCACAGAGACCAACAATGAGAGAAGTCTGTGAGAGGTTGAGAGAGATAACAAAAATGACACCTGAATCAGCAGTTCCAAAACTTTCTCCACTTTGGTGGGCAGAGCTTGAGATTTCTTCTGCAGAAGCATGCTGAAAATCAGTAGATGAGATTGTAATATAAGTAACTAAGTATGCGAGTTTTTTAGCATTGTCATCCTTTTTTCCTTCGCTGAAGGCGCAGAAAAGTTCTCACNTGTATGTAATAGGTAGGATGGTTTGCAAATAACCTGTATACGTACGAGGGAGACCAAAAAATGAGGTGAAGTTCTTTTGGGGTGCTTTGTTTAATTGTAGCTTATGGAATTGCTACCAAGAAAAAAGCTTTTGTATATCAGTTAATTTCAAGTCAGTTTCTGTGGTGAATCAAGATATTTATTTCCAACTCTTTCTTATCCCNTCCAAAATTAGCAAAAATAAGCTTACAAACTGCCAATCTTTTTACCTGCCAAATAGAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00023	54564	59070	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.15.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000023s00004874.1	PF08263.7	LRRNT_2	35	78	2.60E-12
Glyur000023s00004874.1	PF07714.12	Pkinase_Tyr	371	633	2.70E-23

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	7.187
SRR1783600	control	7.238
SRR1783602	moderate drought stress	8.381
SRR1811619	moderate drought stress	8.397

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	11.408
DRR006520	Root Summer glycyrrhizin high producing strain	11.283
DRR006521	Root Winter glycyrrhizin high producing strain	2.687
DRR006522	Root Winter glycyrrhizin high producing strain	2.720
DRR006523	Root Summer glycyrrhizin low producing strain	16.914
DRR006524	Root Summer glycyrrhizin low producing strain	16.905
DRR006525	Leaf Summer glycyrrhizin high producing strain	85.870
DRR006526	Leaf Summer glycyrrhizin high producing strain	85.131

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	10.523
SRR2868004	Drought Stress (root)	16.336
SRR2967015	Control (root)	13.287

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	62.494
SRR9715740	Leaf	82.389
SRR9715741	Leaf	66.794
SRR9715739	Root	3.183
SRR9715742	Root	16.729
SRR9715743	Root	13.127

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	6.584
SRR8749028	MeJA induced 9h	6.479
SRR8749029	MeJA induced 9h	4.566
SRR8749030	Uninduced	3.358
SRR8749031	Uninduced	1.615
SRR8749032	Uninduced	1.531

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	8.891
SRR8400027	Control - Root	10.036