Gene detail information of Glyur000023s00004873 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G58530.1 | 4.00E-39 | Glutaredoxin family protein |
| NR | XP_004491017.1 | 4.12E-136 | PREDICTED: uncharacterized protein At5g39865-like [Cicer arietinum] |
| COG | YP_002526952.1 | 4.00E-06 | glutaredoxin 3 [Rhodobacter sphaeroides KD131] |
| Swissprot | tr|Q9FLE8|Y5986_ARATH | 7.00E-37 | Uncharacterized protein At5g39865 |
| trEMBL | tr|K7KAW7|K7KAW7_SOYBN | 2.00E-135 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G43140.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00023 | 50180 | 50917 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000023s00004873.1 | PF00462.19 | Glutaredoxin | 96 | 162 | 1.00E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.006 |
| SRR1783600 | control | 11.484 |
| SRR1783602 | moderate drought stress | 11.734 |
| SRR1811619 | moderate drought stress | 9.482 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.468 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.871 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 28.334 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 25.472 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.938 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.384 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.289 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.374 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.786 |
| SRR2868004 | Drought Stress (root) | 4.849 |
| SRR2967015 | Control (root) | 6.226 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.818 |
| SRR9715740 | Leaf | 2.854 |
| SRR9715741 | Leaf | 2.852 |
| SRR9715739 | Root | 17.375 |
| SRR9715742 | Root | 16.647 |
| SRR9715743 | Root | 16.073 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 36.256 |
| SRR8749028 | MeJA induced 9h | 34.070 |
| SRR8749029 | MeJA induced 9h | 55.168 |
| SRR8749030 | Uninduced | 11.070 |
| SRR8749031 | Uninduced | 32.736 |
| SRR8749032 | Uninduced | 49.676 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.910 |
| SRR8400027 | Control - Root | 5.720 |