Gene detail information of Glyur000022s00002085 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G69420.2 | 3.00E-168 | DHHC-type zinc finger family protein |
| NR | XP_004514247.1 | 0 | PREDICTED: probable S-acyltransferase At1g69420-like [Cicer arietinum] |
| Swissprot | tr|Q9C533|ZDHC1_ARATH | 0 | Probable protein S-acyltransferase 22 |
| trEMBL | tr|I1NDL5|I1NDL5_SOYBN | 0 | S-acyltransferase {ECO:0000256|RuleBase:RU079119} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00022 | 580175 | 585442 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000022s00002085.1 | PF01529.15 | zf-DHHC | 168 | 314 | 3.00E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.245 |
| SRR1783600 | control | 5.978 |
| SRR1783602 | moderate drought stress | 4.226 |
| SRR1811619 | moderate drought stress | 4.343 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.104 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.376 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.144 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.117 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.993 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.976 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.887 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.706 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.820 |
| SRR2868004 | Drought Stress (root) | 12.582 |
| SRR2967015 | Control (root) | 12.189 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.794 |
| SRR9715740 | Leaf | 2.907 |
| SRR9715741 | Leaf | 5.527 |
| SRR9715739 | Root | 4.762 |
| SRR9715742 | Root | 5.388 |
| SRR9715743 | Root | 4.883 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.619 |
| SRR8749028 | MeJA induced 9h | 2.152 |
| SRR8749029 | MeJA induced 9h | 0.941 |
| SRR8749030 | Uninduced | 1.032 |
| SRR8749031 | Uninduced | 1.158 |
| SRR8749032 | Uninduced | 1.723 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.279 |
| SRR8400027 | Control - Root | 20.968 |