Gene detail information of Glyur000022s00002069 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G14060.1 | 7.00E-24 | GCK domain-containing protein |
| NR | XP_004517013.1 | 1.29E-52 | PREDICTED: immediate-early protein-like [Cicer arietinum] |
| trEMBL | tr|V7BSV6|V7BSV6_PHAVU | 1.00E-47 | Uncharacterized protein {ECO:0000313|EMBL:ESW21054.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00022 | 525749 | 526189 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000022s00002069.1 | PF07802.6 | GCK | 48 | 121 | 1.50E-32 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.350 |
| SRR1783600 | control | 22.210 |
| SRR1783602 | moderate drought stress | 11.318 |
| SRR1811619 | moderate drought stress | 12.064 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 30.320 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 27.262 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.884 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.484 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.469 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.427 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.084 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.821 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 51.062 |
| SRR2868004 | Drought Stress (root) | 25.471 |
| SRR2967015 | Control (root) | 17.012 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.262 |
| SRR9715740 | Leaf | 18.059 |
| SRR9715741 | Leaf | 12.154 |
| SRR9715739 | Root | 2.148 |
| SRR9715742 | Root | 13.589 |
| SRR9715743 | Root | 8.739 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 95.019 |
| SRR8749028 | MeJA induced 9h | 30.884 |
| SRR8749029 | MeJA induced 9h | 63.121 |
| SRR8749030 | Uninduced | 7.643 |
| SRR8749031 | Uninduced | 7.010 |
| SRR8749032 | Uninduced | 9.473 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 28.694 |
| SRR8400027 | Control - Root | 25.004 |