Gene detail information of Glyur000022s00002063 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003556789.1 | 3.24E-44 | PREDICTED: NAC transcription factor 29 [Glycine max] |
| trEMBL | tr|W0CA92|W0CA92_9FABA | 1.00E-41 | NAC domain-containing protein {ECO:0000313|EMBL:AHE80972.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00022 | 492052 | 492408 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.871 |
| SRR1783600 | control | 2.940 |
| SRR1783602 | moderate drought stress | 10.835 |
| SRR1811619 | moderate drought stress | 10.748 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.759 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.751 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 55.102 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 52.079 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.175 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.010 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.908 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.975 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.411 |
| SRR2868004 | Drought Stress (root) | 77.871 |
| SRR2967015 | Control (root) | 57.181 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.996 |
| SRR9715740 | Leaf | 13.534 |
| SRR9715741 | Leaf | 62.582 |
| SRR9715739 | Root | 1.130 |
| SRR9715742 | Root | 2.107 |
| SRR9715743 | Root | 1.568 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 106.491 |
| SRR8749028 | MeJA induced 9h | 488.860 |
| SRR8749029 | MeJA induced 9h | 185.461 |
| SRR8749030 | Uninduced | 202.509 |
| SRR8749031 | Uninduced | 1559.692 |
| SRR8749032 | Uninduced | 531.042 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.498 |
| SRR8400027 | Control - Root | 10.920 |