Gene detail information of Glyur000022s00002022 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G27250.1 | 5.00E-102 | NAD(P)-binding Rossmann-fold superfamily protein |
| NR | KEH30758.1 | 0 | dihydroflavonol 4-reductase-like protein [Medicago truncatula] |
| COG | YP_002015379.1 | 9.00E-40 | NAD-dependent epimerase/dehydratase [Prosthecochloris aestuarii DSM 271] |
| Swissprot | tr|P51110|DFRA_VITVI | 6.00E-82 | Dihydroflavonol-4-reductase |
| trEMBL | tr|A0A072UNZ6|A0A072UNZ6_MEDTR | 0 | Dihydroflavonol 4-reductase-like protein {ECO:0000313|EMBL:KEH30758.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00022 | 304294 | 308091 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000022s00002022.1 | PF01370.16 | Epimerase | 23 | 279 | 9.50E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.145 |
| SRR1783600 | control | 0.156 |
| SRR1783602 | moderate drought stress | 0.589 |
| SRR1811619 | moderate drought stress | 0.550 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.429 |
| SRR2868004 | Drought Stress (root) | 23.077 |
| SRR2967015 | Control (root) | 22.388 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.132 |
| SRR9715739 | Root | 0.111 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.032 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.100 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.076 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.862 |
| SRR8400027 | Control - Root | 3.509 |