Gene detail information of Glyur000022s00002007 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G20720.2 | 3.00E-125 | |
| NR | XP_007149696.1 | 8.41E-171 | hypothetical protein PHAVU_005G091400g [Phaseolus vulgaris] |
| trEMBL | tr|K7LW92|K7LW92_SOYBN | 3.00E-178 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G34250.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00022 | 224705 | 234205 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000022s00002007.1 | PF12624.2 | Chorein_N | 2 | 97 | 7.00E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.641 |
| SRR1783600 | control | 7.611 |
| SRR1783602 | moderate drought stress | 11.788 |
| SRR1811619 | moderate drought stress | 11.789 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.581 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.428 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.558 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.420 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.419 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.408 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.790 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.793 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.041 |
| SRR2868004 | Drought Stress (root) | 7.374 |
| SRR2967015 | Control (root) | 8.897 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.146 |
| SRR9715740 | Leaf | 3.143 |
| SRR9715741 | Leaf | 5.236 |
| SRR9715739 | Root | 1.009 |
| SRR9715742 | Root | 9.394 |
| SRR9715743 | Root | 7.282 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.875 |
| SRR8749028 | MeJA induced 9h | 10.733 |
| SRR8749029 | MeJA induced 9h | 7.466 |
| SRR8749030 | Uninduced | 4.661 |
| SRR8749031 | Uninduced | 5.308 |
| SRR8749032 | Uninduced | 4.093 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.476 |
| SRR8400027 | Control - Root | 15.587 |