Gene detail information of Glyur000022s00001991 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G20570.1 | 1.00E-38 | early nodulin-like protein 9 |
| NR | AFK41191.1 | 1.58E-100 | unknown [Medicago truncatula] |
| Swissprot | tr|Q9SK27|ENL1_ARATH | 1.00E-33 | Early nodulin-like protein 1 (Precursor) |
| trEMBL | tr|G7JF09|G7JF09_MEDTR | 6.00E-101 | Uncharacterized protein {ECO:0000313|EMBL:AFK41191.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00022 | 161118 | 162548 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000022s00001991.1 | PF02298.12 | Cu_bind_like | 40 | 123 | 4.90E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.157 |
| SRR1783600 | control | 15.274 |
| SRR1783602 | moderate drought stress | 13.196 |
| SRR1811619 | moderate drought stress | 13.138 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.045 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.197 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.493 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.479 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.925 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.072 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 19.104 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.693 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 69.993 |
| SRR2868004 | Drought Stress (root) | 68.291 |
| SRR2967015 | Control (root) | 63.960 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.907 |
| SRR9715740 | Leaf | 2.647 |
| SRR9715741 | Leaf | 5.528 |
| SRR9715739 | Root | 6.389 |
| SRR9715742 | Root | 19.140 |
| SRR9715743 | Root | 15.669 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.148 |
| SRR8749029 | MeJA induced 9h | 0.056 |
| SRR8749030 | Uninduced | 0.169 |
| SRR8749031 | Uninduced | 0.110 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.640 |
| SRR8400027 | Control - Root | 18.646 |