Gene detail information of Glyur000022s00001972 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G50200.3 | 6.00E-42 | nitrate transmembrane transporters |
| NR | AFK44790.1 | 6.27E-118 | unknown [Medicago truncatula] |
| Swissprot | tr|Q9FGS5|NRT31_ARATH | 7.00E-64 | High-affinity nitrate transporter 3.1 (Precursor) |
| trEMBL | tr|I3SWZ8|I3SWZ8_MEDTR | 2.00E-118 | Uncharacterized protein {ECO:0000313|EMBL:AFK44790.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00022 | 61841 | 63237 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.103 |
| SRR1783600 | control | 15.490 |
| SRR1783602 | moderate drought stress | 15.271 |
| SRR1811619 | moderate drought stress | 15.196 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.304 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.334 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.973 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.138 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.421 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.014 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 26.117 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 25.666 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 317.517 |
| SRR2868004 | Drought Stress (root) | 279.063 |
| SRR2967015 | Control (root) | 466.855 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 50.844 |
| SRR9715740 | Leaf | 29.103 |
| SRR9715741 | Leaf | 64.199 |
| SRR9715739 | Root | 29.418 |
| SRR9715742 | Root | 21.210 |
| SRR9715743 | Root | 21.622 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 60.700 |
| SRR8749028 | MeJA induced 9h | 148.109 |
| SRR8749029 | MeJA induced 9h | 81.024 |
| SRR8749030 | Uninduced | 109.991 |
| SRR8749031 | Uninduced | 38.438 |
| SRR8749032 | Uninduced | 62.255 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 164.104 |
| SRR8400027 | Control - Root | 91.326 |