Gene detail information of Glyur000022s00001971.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G50210.10quinolinate synthase
NRXP_004515859.10PREDICTED: uncharacterized protein LOC101501046 [Cicer arietinum]
COGYP_007096723.16.00E-21SufE protein probably involved in Fe-S center assembly [Chamaesiphon minutus PCC 6605]
Swissprottr|Q9FGS4|NADA_ARATH0Quinolinate synthase, chloroplastic (Precursor)
trEMBLtr|A0A072UQY1|A0A072UQY1_MEDTR0Quinolinate synthetase A protein {ECO:0000313|EMBL:KEH31761.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold000225331161489+


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
K03517nadAEC:2.5.1.72Nicotinate and nicotinamide metabolismmap00760


Gene Ontology

biological_process

GO:0009435  NAD biosynthetic process


molecular_function

GO:0008987  quinolinate synthetase A activity

GO:0051539  4 iron, 4 sulfur cluster binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000022s00001971.1PF02657.10SufE1132052.30E-13
Glyur000022s00001971.1PF02445.11NadA2876064.70E-29


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.927
SRR1783600control12.170
SRR1783602moderate drought stress10.438
SRR1811619moderate drought stress10.381

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain17.379
DRR006520Root Summer glycyrrhizin high producing strain17.137
DRR006521Root Winter glycyrrhizin high producing strain13.207
DRR006522Root Winter glycyrrhizin high producing strain13.059
DRR006523Root Summer glycyrrhizin low producing strain25.627
DRR006524Root Summer glycyrrhizin low producing strain25.841
DRR006525Leaf Summer glycyrrhizin high producing strain23.520
DRR006526Leaf Summer glycyrrhizin high producing strain23.410

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)17.019
SRR2868004Drought Stress (root)18.387
SRR2967015Control (root)14.978

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf14.124
SRR9715740Leaf14.632
SRR9715741Leaf13.560
SRR9715739Root9.630
SRR9715742Root22.855
SRR9715743Root21.065

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.952
SRR8749028MeJA induced 9h16.374
SRR8749029MeJA induced 9h8.320
SRR8749030Uninduced9.163
SRR8749031Uninduced5.712
SRR8749032Uninduced8.101

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root29.006
SRR8400027Control - Root30.293

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved