Gene detail information of Glyur000022s00001962 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G55740.1 | 3.00E-33 | proline transporter 2 |
| NR | XP_007155498.1 | 0 | hypothetical protein PHAVU_003G206600g [Phaseolus vulgaris] |
| Swissprot | tr|P92961|PROT1_ARATH | 1.00E-43 | Proline transporter 1 |
| trEMBL | tr|K7MLD3|K7MLD3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G13460.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00022 | 7304 | 10078 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000022s00001962.1 | PF01490.13 | Aa_trans | 44 | 210 | 1.10E-18 |
| Glyur000022s00001962.1 | PF01490.13 | Aa_trans | 213 | 370 | 4.20E-24 |
| Glyur000022s00001962.2 | PF01490.13 | Aa_trans | 44 | 119 | 9.60E-06 |
| Glyur000022s00001962.3 | PF01490.13 | Aa_trans | 1 | 91 | 5.50E-08 |
| Glyur000022s00001962.3 | PF01490.13 | Aa_trans | 94 | 251 | 2.50E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.958 |
| SRR1783600 | control | 18.080 |
| SRR1783602 | moderate drought stress | 38.579 |
| SRR1811619 | moderate drought stress | 38.263 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.478 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.372 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 107.680 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 103.987 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.271 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.131 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.782 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.847 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.129 |
| SRR2868004 | Drought Stress (root) | 10.472 |
| SRR2967015 | Control (root) | 13.490 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.424 |
| SRR9715740 | Leaf | 26.288 |
| SRR9715741 | Leaf | 35.490 |
| SRR9715739 | Root | 24.582 |
| SRR9715742 | Root | 17.768 |
| SRR9715743 | Root | 18.932 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.918 |
| SRR8749028 | MeJA induced 9h | 15.483 |
| SRR8749029 | MeJA induced 9h | 4.680 |
| SRR8749030 | Uninduced | 5.371 |
| SRR8749031 | Uninduced | 1.712 |
| SRR8749032 | Uninduced | 0.978 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 49.389 |
| SRR8400027 | Control - Root | 61.521 |