Gene detail information of Glyur000021s00002760 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G04865.1 | 7.00E-93 | Aminotransferase-like, plant mobile domain family protein |
| NR | XP_003529783.1 | 0 | PREDICTED: serine/threonine-protein phosphatase 7 long form homolog isoform X1 [Glycine max] |
| Swissprot | tr|Q9LNG5|PPP7L_ARATH | 1.00E-28 | Serine/threonine-protein phosphatase 7 long form homolog |
| trEMBL | tr|I1KGA8|I1KGA8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G01080.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00021 | 549632 | 554187 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000021s00002760.1 | PF10536.4 | PMD | 152 | 379 | 8.60E-51 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.585 |
| SRR1783600 | control | 5.551 |
| SRR1783602 | moderate drought stress | 8.946 |
| SRR1811619 | moderate drought stress | 9.243 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.027 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.928 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.054 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 17.931 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.245 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.637 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.582 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.322 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.266 |
| SRR2868004 | Drought Stress (root) | 12.747 |
| SRR2967015 | Control (root) | 16.427 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.104 |
| SRR9715740 | Leaf | 14.984 |
| SRR9715741 | Leaf | 11.401 |
| SRR9715739 | Root | 1.982 |
| SRR9715742 | Root | 6.352 |
| SRR9715743 | Root | 6.455 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.578 |
| SRR8749028 | MeJA induced 9h | 28.516 |
| SRR8749029 | MeJA induced 9h | 8.168 |
| SRR8749030 | Uninduced | 17.360 |
| SRR8749031 | Uninduced | 1.820 |
| SRR8749032 | Uninduced | 2.073 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.010 |
| SRR8400027 | Control - Root | 12.778 |