Gene detail information of Glyur000021s00002757 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G13800.1 | 4.00E-138 | Metallo-hydrolase/oxidoreductase superfamily protein |
| NR | XP_004510385.1 | 0 | PREDICTED: putative hydrolase C777.06c-like [Cicer arietinum] |
| COG | YP_005057472.1 | 2.00E-44 | beta-lactamase [Granulicella mallensis MP5ACTX8] |
| trEMBL | tr|G7LHH5|G7LHH5_MEDTR | 0 | Metallo-hydrolase/oxidoreductase superfamily protein {ECO:0000313|EMBL:AET01591.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00021 | 531437 | 536498 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000021s00002757.1 | PF12706.2 | Lactamase_B_2 | 122 | 308 | 5.30E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.853 |
| SRR1783600 | control | 3.940 |
| SRR1783602 | moderate drought stress | 4.300 |
| SRR1811619 | moderate drought stress | 4.057 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.606 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.971 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.968 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.068 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.169 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.298 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.028 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.067 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.575 |
| SRR2868004 | Drought Stress (root) | 8.740 |
| SRR2967015 | Control (root) | 8.250 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.986 |
| SRR9715740 | Leaf | 26.914 |
| SRR9715741 | Leaf | 16.659 |
| SRR9715739 | Root | 2.374 |
| SRR9715742 | Root | 4.032 |
| SRR9715743 | Root | 3.020 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.003 |
| SRR8749028 | MeJA induced 9h | 16.534 |
| SRR8749029 | MeJA induced 9h | 4.412 |
| SRR8749030 | Uninduced | 16.910 |
| SRR8749031 | Uninduced | 0.890 |
| SRR8749032 | Uninduced | 2.127 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.431 |
| SRR8400027 | Control - Root | 11.087 |