Gene detail information of Glyur000021s00002730 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G33000.2 | 1.00E-75 | calcineurin B-like protein 10 |
| NR | XP_003529903.1 | 5.52E-152 | PREDICTED: calcineurin B-like protein 10-like isoform X1 [Glycine max] |
| Swissprot | tr|Q3HRN8|CNBL9_ORYSJ | 1.00E-113 | Calcineurin B-like protein 9 |
| trEMBL | tr|I1KGD3|I1KGD3_SOYBN | 2.00E-152 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G01300.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00021 | 357697 | 361866 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000021s00002730.1 | PF13833.1 | EF-hand_8 | 103 | 149 | 1.20E-05 |
| Glyur000021s00002730.1 | PF13499.1 | EF-hand_7 | 163 | 230 | 1.70E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.140 |
| SRR1783600 | control | 6.998 |
| SRR1783602 | moderate drought stress | 7.359 |
| SRR1811619 | moderate drought stress | 7.103 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.662 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.882 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.620 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.121 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.115 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.110 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.925 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.032 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.415 |
| SRR2868004 | Drought Stress (root) | 16.336 |
| SRR2967015 | Control (root) | 13.386 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 23.688 |
| SRR9715740 | Leaf | 16.175 |
| SRR9715741 | Leaf | 30.381 |
| SRR9715739 | Root | 5.939 |
| SRR9715742 | Root | 6.198 |
| SRR9715743 | Root | 7.103 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.524 |
| SRR8749028 | MeJA induced 9h | 36.281 |
| SRR8749029 | MeJA induced 9h | 14.492 |
| SRR8749030 | Uninduced | 39.228 |
| SRR8749031 | Uninduced | 72.008 |
| SRR8749032 | Uninduced | 43.834 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.169 |
| SRR8400027 | Control - Root | 15.983 |