Gene detail information of Glyur000021s00002705 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G73020.2 | 0 | |
| NR | XP_006585539.1 | 0 | PREDICTED: anoctamin-like protein At1g73020-like isoform X1 [Glycine max] |
| Swissprot | tr|A0MFS9|CACLC_ARATH | 0 | Anoctamin-like protein At1g73020 |
| trEMBL | tr|I1KUY0|I1KUY0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G20980.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00021 | 138160 | 143750 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000021s00002705.1 | PF04547.7 | Anoctamin | 190 | 595 | 1.20E-76 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.904 |
| SRR1783600 | control | 6.105 |
| SRR1783602 | moderate drought stress | 5.566 |
| SRR1811619 | moderate drought stress | 5.412 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.467 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.568 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 126.918 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 124.729 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.664 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.868 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.282 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.308 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.840 |
| SRR2868004 | Drought Stress (root) | 11.887 |
| SRR2967015 | Control (root) | 14.537 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.140 |
| SRR9715740 | Leaf | 4.321 |
| SRR9715741 | Leaf | 7.386 |
| SRR9715739 | Root | 1.033 |
| SRR9715742 | Root | 9.807 |
| SRR9715743 | Root | 7.162 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.425 |
| SRR8749028 | MeJA induced 9h | 21.589 |
| SRR8749029 | MeJA induced 9h | 23.994 |
| SRR8749030 | Uninduced | 38.289 |
| SRR8749031 | Uninduced | 165.976 |
| SRR8749032 | Uninduced | 76.176 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.188 |
| SRR8400027 | Control - Root | 12.547 |