Gene detail

Gene detail information of Glyur000021s00002703

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G51760.1	1.00E-163	peptidase M20/M25/M40 family protein
NR	XP_003531633.1	0	PREDICTED: IAA-amino acid hydrolase ILR1-like 4-like [Glycine max]
COG	NP_578326.1	2.00E-105	IAA-amino acid hydrolase [Pyrococcus furiosus DSM 3638]
Swissprot	tr\|O04373\|ILL4_ARATH	0	IAA-amino acid hydrolase ILR1-like 4 (Precursor)
trEMBL	tr\|I1M5E5\|I1M5E5_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G42880.1}

Sequence

Transcript Sequence

>Glyur000021s00002703.1
AGAAACCATTGAAAGAGTGGGGCCTGCTGATCTTACAAAATAGCTAAGGTTGTACTCTGTTTGCCGTTGACTGTTATTGTGGTAAAGAACAGTTGTTGCAGTTGTTGTTCCGAAGCTATGTGTTTTTTCTTCAAATGCTTCCATTTTCTCATCATCATATTCATACATGTCTTTTCTGCAACAACACCCATCTTCTCAGTAACAGACAAAGATTCTACCTTCAACCCAAACCAACTCTTCACCAATAACTTTCTAGAAAATGCCAAGAGTCCTGAGTTTTTTGGTTGGATGGTCAAAATCAGAAGGAAGATTCANGAGAATCCAGAATTTGGTTATGAAGAATTTGAGACCAGTGAACTGATAAGAGCAGAATTGGATAAACTGGGCATACCCTATAAACACCCAGTTGCAGTCACAGGTGTCATTGGCTTCATAGGGACTGGAAGTTCACCTTTTGTTGCAATAAGAGCTGATATGGATGCTCTTCCCTTGCAGGAATTGGTGGAGTGGGAGCACAAGAGTAAAATACCTGGAAAGATGCACGCGTGTGGTCATGATGCTCATGTTACCATGCTTCTTGGTGCTGCAAAGATTCTCAAAGAGCATGAAAATGAGATACAGGGAACTGTTGTTCTTGTTTTCCAACCAGCAGAGGAAGGAGGTGGAGGGGCTAAGAAAATTTTAGATGCTGGAGTCTTAGAAAATGTTACTGCCATCTTTGGATTGCATGTGGCTCCTAACTTACCAATAGGTGAAGTGAAATCCAGGTCTGGTCCAATATTGGCAGGAAGTGGCGCTTTTGAAGCAATAATAAGCGGAAAAGGAGGTCATGCAGCTATTCCTCAACATTCTATAGACCCCATTTTGGCAGCTTCTAATGTGATCATTAGCTTACAGCACCTTGTTTCTCGTGAGGCTGATCCTCTGGACTCTCAGGTTGTTACGGTTGGAAAGTTGCAAGGGGGTGGTGCATTCAATGTTATTCCAGATTATGTCACAATTGGTGGCACCTTCCGAGCTTTTAATAAAGAGAGCTTCCAACAACTGAGACGGCGGATTGAGCAGGTTATCATTGGGCAAGCTGCTGTGCAGAGGTGCAATGCAACTGTGAACTTCCTTGAAGATGTGAAACCCTCCTACCCTCCATCTGTAAATAGTGGTGATTTGCATGAGCATTTTCATGATGTTGCAGTGAATTTGCTTGGCATCAATAAAGTTAATGAGATGCAACCACTCATGGGAGCTGAAGACTTTGCTTTCTATCAAGAGGTCACACCTGGCTACATCTTCTTTCTTGGAATGCAGAATACCTCACATGAAGAACGGGTTGTGCCATTACACTCACCTTATCTCAAAATCAATGAAGATGGACTTCCTTATGGGGCTGCACTTCATGCATCATTAGCTGCTAGTTATCTTCAAAAACATCAGCAGGACTTACCTGGGGTTGAAGGAAAATATCATGATGAATTATAACTGTTATTCTGTTAATAATCATTACAAGCCAATGTTATCCTTTCCAATTCCAGCTATATATAACAAATTTGAGGGTGGGGTGAAGAAGAGGTTTAGCACAATGGTTGGAGTTGCTATTGCGTGACTAAAAGGTCACGAATTCAAGTCCATTTTCTGGATCTAAATGGTGGTAGCTTTATAACTTGAAGTTGTCCTTATTTTCCTTTTGAATGTGGGGCACTATGCAGAATGGTTTGAAGATGGTTTTAATTGTTATAGTTTAACTTTTGAGGTCAAGAAATATCTGAATAAAAATGTGTTTTATCGGCTGGAGTTGTTAGAAGTCACAATTATAAATTTGGTAATGAGCTGCCTAATTGATCAGTAACAATGTGAATTAAGTAATTAATAGAGTTGATCTAGTCAAAACTTGTCCCTACACTAGCAAAATGTTTGTGTATCTTATTATTCTTATTTGCTGTCAAAGTCATATGGACCAANAATTGTGCCAAATAAAGCACCACCAACAATGTCTTATTCTTACAGAAAGAGTTGACAATGTGAGTTACTATAGTAAACGGCACTGGTAGTCTAGTATTACTACTCACAGATAAAGCAAGGCCAAAAGAAAGGCTTGCTGATATTTGTGCCTACAAAACAACTGGAAACATAACTATAATTCTGACTTCTGAGTAAGCTTCATAGCTCCGGCCTCAGCATCTTGGTTGCAAGGCATACCGAGTAACAGAGATGGAACCTGCCAATGGTAAGAANCCCAAGTCCCCCAACTGGATGCCTCAGAATAATATGCAAGTGTAGGTAAGTGTGCATCATATAATGGCCAGAAAAAAATAACTTGTCTTAATGCCAATACATATTCCAAAAAGATAGCTAAAATATTTATTTAACTATAACAAGTAATACAATAAATGTTAGTCTATATTTTGGCTAATACTTGTATAAAATATGGTTTAAACTAAATGCCCTACACATCTAAATGCTGGGGGAGCAACTCAAAATTTCTGCAGAACAGGGAGAACAGAAGATGAATCATGCGACCAAAATGGATTTAGCTGATAGCTTAGCTAACTAATGCGCCCGAAAAGGCACTCCTTCAAGGATGTAACTCAGAAGCCTGGCATTTTTCATATTCCTAGAACTTTGGGTGCTATATCTAAAAGAGGACCCAAGGCACTAGGTGCAAACTTTCTTGCGAATAAGAAACAAAGGGAAGACGGCTGGTTATTATAGAGACATGTCTGTTCTTGCAAAATTTTCTTGAAGAATTCCTCTTTGATGTCATCCTTCCCAAAGGTAGCTGGGTGAGCACCACCCCTTGACCAGTCCACATAAGTGAGGCTCCTATTTGCCAAAAGATGAGGAGTATTTATGGTTAACATTGTCTGGAAATAGTGCTCATCAACATAGCATTTGTGTGGTCTACAGAATTCTNTGAGTTTGGGATAGTAAGTACTGTCTTCAACTATCCTAACAGCGAGCTCTCGATTAATTTCGAACCACTGAGACCCCTTACGCCAGTCACTCATGTTGATCTCGGGTGCCATGTTTTCATCATACCGTCCTCTCCCATAAGGGCCAGGTTCATCAAATGCACCCATAAAGCTATACCTTGACCGTGATATGTAACGGTATACAATGCTGAAGTTCTGGAGAGGGATGCAGGACTCGGATAAGAGGATAAACCATTCATTTGAGATATCAAGCAATGCATTAGCCAGAAGTCTTCTTTCAGCATCACACATACTCATCATTCCCCACTCTGCCACCTGTGTGAAGAAGGTGGTTAATTAGAAATTTCTTAAAAACAGAATTCAACCTAAAACCTATTCCTGTTCTAACAGTCACATTATCAAAATTGAAAAACAATGAGCATTAATTGAGGAACATCTCAAGGAGTGAGTTTATATGTTTTGACAAGCTTGTTTGGTTTTAGAAGTATATTGTCCATATGAATTATTGATAATAAGAAAAACCATAGAATAGCAGACATGTTTGGT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00021	125581	133560	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0008152 metabolic process

molecular_function
GO:0016787 hydrolase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000021s00002703.1	PF01546.23	Peptidase_M20	115	430	7.20E-33
Glyur000021s00002703.1	PF07687.9	M20_dimer	224	318	1.20E-10

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	7.444
SRR1783600	control	7.519
SRR1783602	moderate drought stress	6.341
SRR1811619	moderate drought stress	6.072

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	6.969
DRR006520	Root Summer glycyrrhizin high producing strain	6.836
DRR006521	Root Winter glycyrrhizin high producing strain	6.876
DRR006522	Root Winter glycyrrhizin high producing strain	6.917
DRR006523	Root Summer glycyrrhizin low producing strain	7.241
DRR006524	Root Summer glycyrrhizin low producing strain	7.009
DRR006525	Leaf Summer glycyrrhizin high producing strain	9.934
DRR006526	Leaf Summer glycyrrhizin high producing strain	9.910

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	19.980
SRR2868004	Drought Stress (root)	20.171
SRR2967015	Control (root)	18.178

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	17.385
SRR9715740	Leaf	23.891
SRR9715741	Leaf	20.679
SRR9715739	Root	13.553
SRR9715742	Root	11.232
SRR9715743	Root	10.620

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.887
SRR8749028	MeJA induced 9h	7.648
SRR8749029	MeJA induced 9h	5.221
SRR8749030	Uninduced	6.340
SRR8749031	Uninduced	3.570
SRR8749032	Uninduced	3.841

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	14.995
SRR8400027	Control - Root	12.766