Gene detail information of Glyur000021s00002689 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G59650.1 | 7.00E-36 | Leucine-rich repeat protein kinase family protein |
| NR | XP_003637167.1 | 3.78E-89 | Receptor-like protein kinase [Medicago truncatula] |
| Swissprot | tr|C0LGW2|PAM74_ARATH | 1.00E-39 | Probable LRR receptor-like serine/threonine-protein kinase PAM74 (Precursor) |
| trEMBL | tr|G7ZYL7|G7ZYL7_MEDTR | 1.00E-89 | Receptor-like protein kinase {ECO:0000313|EMBL:AES84305.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00021 | 55150 | 64488 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000021s00002689.1 | PF12819.2 | Malectin_like | 4 | 161 | 3.90E-52 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.026 |
| SRR1783600 | control | 0.052 |
| SRR1783602 | moderate drought stress | 0.149 |
| SRR1811619 | moderate drought stress | 0.169 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.147 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.059 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.361 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.009 |
| SRR2868004 | Drought Stress (root) | 0.013 |
| SRR2967015 | Control (root) | 0.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.790 |
| SRR9715740 | Leaf | 2.589 |
| SRR9715741 | Leaf | 11.881 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.021 |
| SRR9715743 | Root | 0.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.085 |
| SRR8749028 | MeJA induced 9h | 0.652 |
| SRR8749029 | MeJA induced 9h | 0.151 |
| SRR8749030 | Uninduced | 0.377 |
| SRR8749031 | Uninduced | 0.144 |
| SRR8749032 | Uninduced | 0.122 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.011 |
| SRR8400027 | Control - Root | 0.000 |