Gene detail

Gene detail information of Glyur000021s00002684

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G51980.1	5.00E-130	Insulinase (Peptidase family M16) protein
NR	XP_004510321.1	0	PREDICTED: mitochondrial-processing peptidase subunit alpha-like [Cicer arietinum]
COG	YP_005032013.1	2.00E-39	putative zinc protease (mpp-like) [Azospirillum brasilense Sp245]
Swissprot	tr\|P29677\|MPPA_SOLTU	0	Mitochondrial-processing peptidase subunit alpha (Precursor)
trEMBL	tr\|I1KGH6\|I1KGH6_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G01720.1}

Sequence

Transcript Sequence

>Glyur000021s00002684.1
ATTAAAATAAAATGTTATTGACCATTTCCAAATAAATCTGCTTCTCTCTCGGCGGTGGTGCCCTGCTTCATAGGCTTCTCGGCAGACCCTGAAAAAAACTACAAAGTACATCGAAAGTACTCGCTTTAGATTTAGGGATTCATCGTCACTCGTCATGTACAGAGCAGCAGCTTCATCACTCAAGAGGCACCTCAAGGGCCGTGGTGGCAACTTGGGGGCCACTAGGTTTGCAACCTCAGCTGCGGTAGCTACAAAAACTTCCTCTGGTGGTTTGTTTAGCTGGCTTACCGGGGAGCATTCTAGTTCCCTTCCTCCTCTTGACAAACCACTTGCTGGTGTTGTCCTTCCTGATCCCCTACCAGACTATGTTGAACCAAGCAAGACCAAGATCACAACTCTCTCCAATGGGTTCAAAATTGCGTCAGAGACCTCNCCNGTATCCTCAATTGGGNTATATCTCGATTGTGGTTCCATCTANGAGACGCCATTGTCAAGNGGGGCTTCACACTTGCTCGAGCGAATGGCTTTCAAGAGCACGACAAACCGTAGTCACTTCTGTATTGTGAGGGAAGTGGAAGCAATTGGTGGTAATATAGGAGCCTCAGCCTCTCGAGAGCAAATGGGCTACACATTTGATGCTTTGAAGACTTATGTTCCACAGATGGTTGAGTTGCTCATTGACTGTGTAAGGAACCCGGCCTTCTTGGACTGGGAGGTCAATGAAGAGCTTCAAAAGGTGAAAGCTGAGCTTGGAGAACTCTCAAACAATCCCCAGGGCTTGCTTTTGGAAGCAATTCACTCTGCTGGTTATTCTGGTGCATTGGCTTATCCTCTTTTGGCTCCTGAATCAGCACTGAACAGATTGGATGGCCCCAGTTTAGAGGAATTTGTTGCTGAGAATTACACAGCTCCTAGAATGGTACTTGCAGCATATGGGGTTGAGCATGAAGAGCTTGTGTCTGTTGCCGAGCCACTTCTCTCTGACNTGCCAAGTGTTCCCCGTCCTGAAGAACCAAAATCTACCTATGTTGGAGGTGATTTTCGCCGTCAAGGTGAATCAGGGGGTACNCATGTTGCTATTGCTTTTGAAGTGCCTGGTGGCTGGCAAAAAGAGAGAGATGCTGTAGTATTGACTGTTCTACAGATGCTTATGGGGGGAGGTGGCTCATTCTCAGCAGGGGGCCCTGGGAAAGGGATGCACTCAAGACTGTATCTTCGCGTGTTGAATGAATATCAACAGATTCAATCTTTCTCTGCATTNAACAGTATCTTCAATAATACAGGACTGTTTGGCATTTACGCAAGCACTGTAAGGAAATTTTTTTGCGATGATTGCTTCAGAAGATATAGGAAGGCAGATTTTGACTTACGGAGAAAGGTNAAAATAATCATTCCCAAAAAAATCAGATTTTTCTTTTCATTTTCATCCTTCATAAATGTGCCCAGCTATGAATCTGTGAACAGCATGTTCCATGCCAAATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00021	15138	20288	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006508 proteolysis

molecular_function

GO:0003824 catalytic activity

GO:0004222 metalloendopeptidase activity

GO:0046872 metal ion binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000021s00002684.1	PF00675.15	Peptidase_M16	90	230	8.00E-35
Glyur000021s00002684.1	PF05193.16	Peptidase_M16_C	241	386	4.40E-28

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	20.117
SRR1783600	control	19.705
SRR1783602	moderate drought stress	12.461
SRR1811619	moderate drought stress	14.797

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	18.616
DRR006520	Root Summer glycyrrhizin high producing strain	18.390
DRR006521	Root Winter glycyrrhizin high producing strain	22.595
DRR006522	Root Winter glycyrrhizin high producing strain	21.088
DRR006523	Root Summer glycyrrhizin low producing strain	12.102
DRR006524	Root Summer glycyrrhizin low producing strain	13.001
DRR006525	Leaf Summer glycyrrhizin high producing strain	16.082
DRR006526	Leaf Summer glycyrrhizin high producing strain	15.465

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	62.736
SRR2868004	Drought Stress (root)	44.066
SRR2967015	Control (root)	41.855

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	24.330
SRR9715740	Leaf	23.884
SRR9715741	Leaf	22.518
SRR9715739	Root	21.177
SRR9715742	Root	28.137
SRR9715743	Root	25.828

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	33.904
SRR8749028	MeJA induced 9h	49.428
SRR8749029	MeJA induced 9h	20.845
SRR8749030	Uninduced	18.227
SRR8749031	Uninduced	10.219
SRR8749032	Uninduced	8.076

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	36.091
SRR8400027	Control - Root	32.012