Gene detail information of Glyur000020s00001844 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G61340.1 | 2.00E-56 | |
| NR | NP_001241590.1 | 0 | uncharacterized protein LOC100802807 [Glycine max] |
| trEMBL | tr|C6TDM7|C6TDM7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G21170.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00020 | 597239 | 598243 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.416 |
| SRR1783600 | control | 6.299 |
| SRR1783602 | moderate drought stress | 6.546 |
| SRR1811619 | moderate drought stress | 6.537 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.921 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 29.986 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.437 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.466 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.210 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.103 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.348 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.326 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.313 |
| SRR2868004 | Drought Stress (root) | 16.826 |
| SRR2967015 | Control (root) | 19.721 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.823 |
| SRR9715740 | Leaf | 1.652 |
| SRR9715741 | Leaf | 1.251 |
| SRR9715739 | Root | 2.896 |
| SRR9715742 | Root | 7.230 |
| SRR9715743 | Root | 6.615 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.703 |
| SRR8749028 | MeJA induced 9h | 2.447 |
| SRR8749029 | MeJA induced 9h | 0.285 |
| SRR8749030 | Uninduced | 2.268 |
| SRR8749031 | Uninduced | 1.191 |
| SRR8749032 | Uninduced | 0.177 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.862 |
| SRR8400027 | Control - Root | 17.115 |