Gene detail information of Glyur000020s00001811 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G74670.1 | 2.00E-33 | Gibberellin-regulated family protein |
| NR | AFK42462.1 | 3.52E-65 | unknown [Lotus japonicus] |
| Swissprot | tr|Q6NMQ7|GASA6_ARATH | 2.00E-45 | Gibberellin-regulated protein 6 (Precursor) |
| trEMBL | tr|I3SQC0|I3SQC0_LOTJA | 1.00E-65 | Uncharacterized protein {ECO:0000313|EMBL:AFK42462.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00020 | 426168 | 427411 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000020s00001811.1 | PF02704.9 | GASA | 46 | 105 | 2.40E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.764 |
| SRR1783600 | control | 15.816 |
| SRR1783602 | moderate drought stress | 0.963 |
| SRR1811619 | moderate drought stress | 1.016 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.928 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.798 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.870 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.877 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 168.279 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 167.692 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.684 |
| SRR2868004 | Drought Stress (root) | 9.339 |
| SRR2967015 | Control (root) | 10.793 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 200.264 |
| SRR9715740 | Leaf | 16.077 |
| SRR9715741 | Leaf | 53.140 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 3.691 |
| SRR9715743 | Root | 2.553 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.867 |
| SRR8400027 | Control - Root | 43.944 |