Gene detail information of Glyur000020s00001805 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G26850.2 | 0 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| NR | XP_004499421.1 | 0 | PREDICTED: probable methyltransferase PMT2-like isoform X1 [Cicer arietinum] |
| COG | YP_004406938.1 | 8.00E-08 | methyltransferase [Verrucosispora maris AB-18-032] |
| Swissprot | tr|B9DFI7|PMT2_ARATH | 0 | Probable methyltransferase PMT2 |
| trEMBL | tr|A0A072V5N2|A0A072V5N2_MEDTR | 0 | Methyltransferase PMT2-like protein {ECO:0000313|EMBL:KEH33485.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00020 | 378671 | 382943 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000020s00001805.1 | PF03141.11 | Methyltransf_29 | 94 | 594 | 3.30E-220 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.876 |
| SRR1783600 | control | 5.963 |
| SRR1783602 | moderate drought stress | 5.450 |
| SRR1811619 | moderate drought stress | 5.476 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.817 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.726 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.259 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.300 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.569 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.430 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.931 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.771 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.552 |
| SRR2868004 | Drought Stress (root) | 23.980 |
| SRR2967015 | Control (root) | 21.574 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 31.870 |
| SRR9715740 | Leaf | 40.575 |
| SRR9715741 | Leaf | 30.703 |
| SRR9715739 | Root | 2.881 |
| SRR9715742 | Root | 6.477 |
| SRR9715743 | Root | 6.895 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.820 |
| SRR8749028 | MeJA induced 9h | 11.360 |
| SRR8749029 | MeJA induced 9h | 4.184 |
| SRR8749030 | Uninduced | 4.771 |
| SRR8749031 | Uninduced | 1.322 |
| SRR8749032 | Uninduced | 0.862 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.432 |
| SRR8400027 | Control - Root | 18.573 |