Gene detail information of Glyur000020s00001802.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G47620.1 | 8.00E-45 | TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 |
| NR | XP_007138192.1 | 8.22E-124 | hypothetical protein PHAVU_009G188100g [Phaseolus vulgaris] |
| Swissprot | tr|Q93Z00|TCP14_ARATH | 2.00E-64 | Transcription factor TCP14 |
| trEMBL | tr|V7B171|V7B171_PHAVU | 3.00E-124 | Uncharacterized protein {ECO:0000313|EMBL:ESW10186.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00020 | 356303 | 357583 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | TCP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000020s00001802.1 | PF03634.8 | TCP | 94 | 204 | 8.80E-37 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.745 |
| SRR1783600 | control | 17.020 |
| SRR1783602 | moderate drought stress | 34.451 |
| SRR1811619 | moderate drought stress | 36.017 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.884 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 24.108 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.601 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.829 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 27.310 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 25.735 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.647 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.281 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.947 |
| SRR2868004 | Drought Stress (root) | 25.248 |
| SRR2967015 | Control (root) | 32.485 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.475 |
| SRR9715740 | Leaf | 8.122 |
| SRR9715741 | Leaf | 4.725 |
| SRR9715739 | Root | 26.871 |
| SRR9715742 | Root | 28.837 |
| SRR9715743 | Root | 29.465 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.146 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.166 |
| SRR8749030 | Uninduced | 0.099 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.092 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.523 |
| SRR8400027 | Control - Root | 15.123 |