Gene detail information of Glyur000020s00001789 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G28857.1 | 2.00E-09 | basic helix-loop-helix (bHLH) DNA-binding family protein |
| NR | XP_003528189.1 | 5.65E-36 | PREDICTED: transcription factor bHLH135-like [Glycine max] |
| Swissprot | tr|Q6YUX0|ILI5_ORYSJ | 2.00E-14 | Transcription factor ILI5 |
| trEMBL | tr|I1KCR4|I1KCR4_SOYBN | 2.00E-36 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G20520.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00020 | 324872 | 325295 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.487 |
| SRR1783600 | control | 2.503 |
| SRR1783602 | moderate drought stress | 0.218 |
| SRR1811619 | moderate drought stress | 0.729 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.048 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.385 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.400 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.101 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.881 |
| SRR2868004 | Drought Stress (root) | 0.413 |
| SRR2967015 | Control (root) | 0.158 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.228 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.221 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.911 |
| SRR8749028 | MeJA induced 9h | 0.302 |
| SRR8749029 | MeJA induced 9h | 0.450 |
| SRR8749030 | Uninduced | 0.334 |
| SRR8749031 | Uninduced | 0.896 |
| SRR8749032 | Uninduced | 0.603 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.517 |
| SRR8400027 | Control - Root | 16.280 |