Gene detail information of Glyur000020s00001777 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G62550.1 | 2.00E-41 | |
| NR | KHN19382.1 | 1.65E-151 | hypothetical protein glysoja_012302 [Glycine soja] |
| trEMBL | tr|I1KCQ1|I1KCQ1_SOYBN | 1.00E-151 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G20320.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00020 | 253890 | 256706 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.925 |
| SRR1783600 | control | 2.923 |
| SRR1783602 | moderate drought stress | 5.555 |
| SRR1811619 | moderate drought stress | 5.937 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.135 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.474 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.277 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.054 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.252 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.277 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.783 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.504 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.101 |
| SRR2868004 | Drought Stress (root) | 4.803 |
| SRR2967015 | Control (root) | 7.605 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.465 |
| SRR9715740 | Leaf | 1.541 |
| SRR9715741 | Leaf | 1.446 |
| SRR9715739 | Root | 0.856 |
| SRR9715742 | Root | 1.213 |
| SRR9715743 | Root | 1.784 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.708 |
| SRR8749028 | MeJA induced 9h | 4.267 |
| SRR8749029 | MeJA induced 9h | 2.082 |
| SRR8749030 | Uninduced | 3.903 |
| SRR8749031 | Uninduced | 4.756 |
| SRR8749032 | Uninduced | 4.066 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.999 |
| SRR8400027 | Control - Root | 10.449 |