Gene detail

Gene detail information of Glyur000020s00001774.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G15130.1	5.00E-54	WRKY DNA-binding protein 72
NR	XP_003528183.1	0	PREDICTED: probable WRKY transcription factor 72-like [Glycine max]
Swissprot	tr\|Q9LXG8\|WRK72_ARATH	2.00E-80	Probable WRKY transcription factor 72
trEMBL	tr\|I1KCP9\|I1KCP9_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA06G20300.1}

Sequence

Transcript Sequence

>Glyur000020s00001774.1
ATGGAGCTTGTCTCGGAAAGATCTCGTCATGAAGCTGGAGGTAAAGGAGCCAAGGAAGGGAAGAGAAGTGAATCAAGTGGTGATGATGAAAATCTTCCTGAACAAGAAAATATTGTTGCTCAGGTTGATGAGCTTGAAAAGACCAAAGTCGAAATGGGTGGAGTGATGGAAGAAAATGAACGGTTAAAGATGAGGTTGAACCGAATACTGAATGAATACCGTACACTGCAAATGCAATTCAACAACATAGTTGAACAAGAGACCAAAAACTCTTCTGATAAACTCAACAATATCATTGAGGAATCAGATGAGTTAGTTTCCCTCAGTCTTGGAAGACTTCCAAGTAACCCAATAGCCAAAGTCTCTAATAAACAAACATTGAAAGAGGAAGAAGAACATGAGAAAGAAGGCTTGGCTCTTGGACTGGACTGCAAATTTGAGACATCAAAATCAGGAAGCACAACAGAACATTTGCCAGCAACAAATAATCCAAGCCCTACCAATAGTTCTGAATTAGTACCAAAGGAAGAAGCTGGGGAGACTTGGCCACCAAGTAAGACCACAAACAAGGCAGCAATTAGATCAGTTGCAGCAGAAGATGAAGTAATTTCCCAACAAAACCCTGCAAAGAAAGCTAGAGTTTGTGTGAGAGCAAGATGTGACACCCCAACTTTGAATGATGGATGCCAATGGAGGAAATATGGACAGAAGATCTCAAAGGGAAATCCATGCCCTCGAGCTTACTATCGTTGTACAGTTGCAACATCATGCCCCGTGAGAAAGCAGGTGCAAAGATGTGCACAGGACATGTCCATATTAATCACAACATACGAAGGGACCCACAACCACCCTCTTCCTCTGTCAGCTACTGCCATGGCTTCCACCACTTCTGCAGCTGCTTCCATGCTCTTGTCTGGCTCTTCAACCTCAAGCTCTCACCCTGGATTAACAACAATACCTTCAACATACACCACCACCACTGCTTCTGCAGGTCTTCAATATGGAATGAACTTTTCCCTATCAGATGCTTCCATTAATAAATCCAAGCAATTCTACCACCTTTCCCATCCTTCCCTATCCTCTTCAGCCAATTCACACCCAACCATCACTCTTGACCTCACCTCAAATCCACCTTCATCCTCTTCATCTCCTTTTGCTAGATTCACTTCAGACTACAACAACCCCTCAAGGTACCCTTCTTCCACAACAAGCCTCAACTTCAGTTCCTCAGAATCCAACAATGCTGTGTCTTGGAGCAATGGAATGAATGGATTCCTTAGCTACAGTGCTGCTCCTCAACAACCCTATAACAACAGGAACAATATCCTTAGCACCATAAACATAAACCCTGTAAGACAACAACCAATGGAAAATAACAATATCTACAGTTCCTACATGCAAAGGAACAACAGTAATATTCCAATTCAGAGTCAACAACAATCTTTGCCAGACAGTACCATAGCAGCAGCAACAAAAGCAATCACAGCAGACCCAAGTTTTCAGTCAGCTTTGGCAGCAGCACTTACATCAATCATTGGCACAAAAAGTACTACTGCAACCACTACTCAAGGAAACCACCACCAGCAGGGTAGTACTTCTGTTGGAGAGAATTTGGGGCAGAAAATGAAATGGGGGGAGCTGTTTTCCTCATCTTCTGCCTTGCCAGCTGCTTCCACTGCTTCGAAAGTTAGTAGTGGCTGTGCATCGAGCTTCTTGAACAAAGCACCTTCTGCTGCTACTACACAGACGGGGAGTTTGATGTGTCTACAACAACCTTTGCCATTTCCTGGCCCCAAAAGTGCTTCTGCGTCTCCTGGTGATAATAGAGACACCACAAATTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00020	242582	246310	+

Gene family

Gene family	subfamily
Transcription Factors Family	WRKY

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function

GO:0003700 transcription factor activity, sequence-specific DNA binding

GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000020s00001774.1	PF03106.10	WRKY	226	284	2.20E-27

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.825
SRR1783600	control	0.823
SRR1783602	moderate drought stress	0.176
SRR1811619	moderate drought stress	0.175

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.008
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	53.642
SRR2868004	Drought Stress (root)	81.161
SRR2967015	Control (root)	75.167

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.535
SRR9715740	Leaf	0.253
SRR9715741	Leaf	0.426
SRR9715739	Root	0.027
SRR9715742	Root	0.575
SRR9715743	Root	0.485

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	126.682
SRR8749028	MeJA induced 9h	396.904
SRR8749029	MeJA induced 9h	166.656
SRR8749030	Uninduced	743.859
SRR8749031	Uninduced	1010.069
SRR8749032	Uninduced	428.520

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	30.111
SRR8400027	Control - Root	14.381