Gene detail information of Glyur000020s00001770 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G74730.1 | 1.00E-35 | Protein of unknown function (DUF1118) |
| NR | XP_002271953.1 | 9.92E-90 | PREDICTED: uncharacterized protein LOC100250168 [Vitis vinifera] |
| trEMBL | tr|A5C347|A5C347_VITVI | 4.00E-90 | Putative uncharacterized protein {ECO:0000313|EMBL:CAN62049.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00020 | 227149 | 229204 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000020s00001770.1 | PF06549.7 | DUF1118 | 82 | 197 | 1.70E-50 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.020 |
| SRR1783600 | control | 4.844 |
| SRR1783602 | moderate drought stress | 6.901 |
| SRR1811619 | moderate drought stress | 6.579 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.385 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.666 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.891 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.318 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.762 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.478 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 70.586 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 68.790 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.528 |
| SRR2868004 | Drought Stress (root) | 34.088 |
| SRR2967015 | Control (root) | 29.106 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 33.836 |
| SRR9715740 | Leaf | 38.342 |
| SRR9715741 | Leaf | 24.403 |
| SRR9715739 | Root | 4.985 |
| SRR9715742 | Root | 6.708 |
| SRR9715743 | Root | 5.972 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.965 |
| SRR8749028 | MeJA induced 9h | 32.964 |
| SRR8749029 | MeJA induced 9h | 34.451 |
| SRR8749030 | Uninduced | 37.625 |
| SRR8749031 | Uninduced | 39.512 |
| SRR8749032 | Uninduced | 32.257 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.698 |
| SRR8400027 | Control - Root | 11.681 |