Gene detail information of Glyur000020s00001757 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G12490.2 | 1.00E-35 | cystatin B |
| NR | XP_003543365.1 | 4.67E-55 | PREDICTED: cysteine proteinase inhibitor [Glycine max] |
| Swissprot | tr|Q06445|CYTI_VIGUN | 2.00E-55 | Cysteine proteinase inhibitor |
| trEMBL | tr|C6SYG7|C6SYG7_SOYBN | 9.00E-55 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G08800.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00020 | 152233 | 155290 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000020s00001757.1 | PF00031.16 | Cystatin | 14 | 92 | 1.70E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 49.696 |
| SRR1783600 | control | 49.400 |
| SRR1783602 | moderate drought stress | 33.069 |
| SRR1811619 | moderate drought stress | 32.806 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 103.423 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 102.113 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 71.723 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 70.727 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 79.441 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 80.816 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 116.054 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 114.813 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 171.989 |
| SRR2868004 | Drought Stress (root) | 173.484 |
| SRR2967015 | Control (root) | 146.105 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 208.791 |
| SRR9715740 | Leaf | 262.283 |
| SRR9715741 | Leaf | 189.272 |
| SRR9715739 | Root | 31.325 |
| SRR9715742 | Root | 90.516 |
| SRR9715743 | Root | 79.131 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 44.622 |
| SRR8749028 | MeJA induced 9h | 66.437 |
| SRR8749029 | MeJA induced 9h | 48.296 |
| SRR8749030 | Uninduced | 70.121 |
| SRR8749031 | Uninduced | 43.062 |
| SRR8749032 | Uninduced | 37.710 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 267.820 |
| SRR8400027 | Control - Root | 289.906 |