Gene detail

Gene detail information of Glyur000019s00002188

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G57530.1	0	calcium-dependent protein kinase 32
NR	NP_001266123.1	0	calcium-dependent protein kinase 32-like [Cicer arietinum]
COG	YP_642814.1	8.00E-31	serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
Swissprot	tr\|Q6NLQ6\|CDPKW_ARATH	0	Calcium-dependent protein kinase 32
trEMBL	tr\|Q7XZK4\|Q7XZK4_CICAR	0	Calcium-dependent calmodulin-independent protein kinase isoform 2 {ECO:0000313\|EMBL:AAP72282.2}

Sequence

Transcript Sequence

>Glyur000019s00002188.1
CTTTCCCATGGAAAGAGAAAATAAAAAAATTAACAAATCATAACAAAAAAAAGTCTTAATAATAAGAGAGAGAAAGAAAAAAGGAGAGAGAGAGAGAGAGAGACGACGACGACGACGACGACGAAGGACGAAGTCTCTGCGAAACAAGTTTTTGAGTTTTGACCCTCTCTCAGCTAATCATCGATGAACCCATTATCATGGTGTCAAACACGCGTTAAATTCATCTCCCCAAAACCCCTCCCTTAAATCACCCCTTCACTCCTCTTCCCCTTTCTGAATCAATCAATCAATCAACCCTCTTCAAAANTTTTTTTTCTCTCTCCCATTTTTCGCCGTAACCCATTTCAACCTCATCCTCCAACTTTAATTGGGGACACGGATCTAAGGATTTCCGAGCAGAAAACCTCGTAAAAGCGGAACCTTTTCCCGGTTCCGAAACATGGGTAACTGCTGCGCGACCCCTTCGGTGACCGGAGAGGAAACAAACAAAAAGAACAAAAAGGGCAAAAAGGAAAACCCCTTCGCCGTCGAGTACGGCTTCAACAGCAACAACGCCGGTGGAGGTGGGGGTTCGAAACTCACCGTTTTGAAGAACCCTACGGGTAGGGAGATCGAGGTTCGGTACGAGCTAGGTCGGGAGCTAGGTAGGGGCGAGTTCGGGATAACGTACCTGTGCACGGATAAGGAGACAGGGGAGGAGCTAGCGTGCAAGTCGATATCGAAGAAGAAGCTCAGAACCGCCATAGATATTGAGGATGTTAGAAGGGAGGTTGAGATCATGAGACACCTACCTCCACACCCCAACATCGTCACGCTTAAGGATACCTATGAGGACGACAATGCCGTTCACCTTGTTATGGAGCTTTGTGAGGGTGGTGAGCTCTTCGATCGTATTGTCGCGCGTGGTCACTACACCGAACGCGCCGCCGCCGCCGTCACCAAAACCATCGTCGAAGTCGTCCAGATGTGCCACAAACACGGTGTGATGCATCGGGATCTCAAGCCTGAGAACTTTCTGTTTGCAAATAAGAAGGAAACAGCACCTCTGAAAGCTATAGATTTTGGATTGTCAGTGTTCTTTAAACCAGGGGAAAGATTTAATGAGATAGTTGGAAGTCCATATTACATGGCTCCTGAGGTATTGAAGAGAAACTATGGCCCAGAAGTAGATATCTGGAGTGCTGGAGTAATTCTATACATCTTACTCTGTGGTGTCCCACCATTTTGGGCAGAAACTGAGCAAGGAGTTGCACAAGCAATTATACGATCTGTTGTTGATTTCAAAAGGGATCCATGGCCAAAGGTTTCTGATAATGCAAAAGACCTTGTGAAGAAGATGCTAGATCCCGACCCGAAGCGGCGACTTACTGCACAGGAAGTATTAGATCATCCATGGTTACAAAATGCAAAGAAGGCTCCCAATGTTTCATTAGGAGAAACAGTTAGAGCAAGGCTCAAGCAATTTTCCGTAATGAACAAGCTTAAGAAAAGAGCTCTGAGGGTGATTGCAGAGCATTTGTCTGTAGAAGAAGCTGCGGGACTAAAAGAGGGATTCCAGCTTATGGATACAGGCAACAAAGGCAAGATTAACATTGATGAACTACGAGTAGGGTTGCATAAACTAGGCCATCAAATTCCTGAAGCGGATGTCCAAATTCTTATGGAAGCTGTGAGTATTACTATCACCCTTTATCTGGGTGATGTAGACAAGGATGGGCACCTAGATTATGGAGAGTTTGTGGCCATTTCCGTTCATCTGAGAAAGATGGGAAATGACGAGCACCTTCACAAAGCCTTCCAATTTTTTGATCAAAACCAAAGTGGGTATATTGAGATCGAGGAACTGCGCAACGCCTTGTCTGATGAAGTTGAAACAAACAGTGAAGAAGTCATCAATGCAATTATGCATGATGTGGACACAGATAAGGATGGAAGGATAAGTTATGAGGAGTTTGCTACAATGATGAAGGCTGGAACAGATTGGAGAAAGGCATCAAGGCAGTATTCGAGAGAGAGGTTTACCAGTCTCAGCCTGAAATTGATGAAGGATGGGTCATTGCAATTGAACAATGAAACACAATGACGGTAGATGACTATTTTAGAAATATGCCAATTTTACTTTTGGGAAAGAAAACATGATAAGGAAGTATATTATTAATTCTTTTATATTTTTAACCTTCTCTCTTCATTGTAATTCTTTTCTCCAATACCCCATTTTTGGGTGGAAAACAAAAAGATAGGATATTGGCCTCAGCAAGTGGTGTGTATGTTGTTGTTTGGTGTAATGTGTCTTTTTGGTTTGTTGTTGAGATTTGTGATATAGGAAGACAGACAGGAGAGGGTCGGAGGGAGTGGACAAAGTCTTCATTTCTGGCTGTAAATATTTTTTAATTTTTACGCTTTATATTTAACTTGCCGTTTTTTTTTTGGTCCAATTAACTTGGCATTTTAAGGCAAACCTTGTCTGCCCCTTGTTTGGACTGCAATGTTACTATGTTAGGGCCAAGCCCATCAATGGCGACTAAAATTTCACACACACTAGTAATGTTATTATAGTGATGCATATACAATTGTTGGCCAAAAAAGAGAAAGTGATGCCATATACAATTTATCCTATGTTTTAGGATATGAATTTGTACTGGCTTTTTTTTNACAACAACGGTATTTGTTCACTCAAATTGGTAAAATATATCNAAAATAATACAAATTTGACACTGCTAAAAATCAAAAGGGTAAATATGCGAATAAACTTATAGCANCCAGGTTAATAGCAAAACACGGCAAAATGCTTACAGCAGCAAAGCACTCATGTCTCTGGGTCTGTAATGTTGACGCTCAAATCGTAGGTGAATCTGTACTGGAACGAAGCAGATCAACCAGTCTGAAACAAACAAACACTGCATTAAGACGGGAAAACACACGCCGCACGAAGACGAGAAACACTGCCGCATGCAGACAACGAAAACTCTAAAAAAACACAAAAGAAAAATCAGATCTATGTGGAAGAACTACTTATCTAGATAAAAAAAACTAAAAAACGAAGTAGAGGGGTGGTTCTAGACCAAAAAATGGTC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00019	599558	604247	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.2.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K13412	CPK	EC:2.7.11.1	Plant-pathogen interaction	map04626
			Plant-pathogen interaction	map04626
			Toxoplasmosis	map05145
			Toxoplasmosis	map05145

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005509 calcium ion binding

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000019s00002188.1	PF00069.20	Pkinase	62	320	4.70E-74
Glyur000019s00002188.1	PF13499.1	EF-hand_7	369	436	6.40E-07
Glyur000019s00002188.1	PF13499.1	EF-hand_7	449	509	1.20E-15
Glyur000019s00002188.2	PF00069.20	Pkinase	62	320	4.50E-74
Glyur000019s00002188.2	PF13499.1	EF-hand_7	369	427	6.90E-08
Glyur000019s00002188.2	PF13499.1	EF-hand_7	440	500	1.10E-15

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	21.912
SRR1783600	control	22.185
SRR1783602	moderate drought stress	18.291
SRR1811619	moderate drought stress	18.620

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	58.919
DRR006520	Root Summer glycyrrhizin high producing strain	58.322
DRR006521	Root Winter glycyrrhizin high producing strain	12.887
DRR006522	Root Winter glycyrrhizin high producing strain	12.380
DRR006523	Root Summer glycyrrhizin low producing strain	123.937
DRR006524	Root Summer glycyrrhizin low producing strain	123.513
DRR006525	Leaf Summer glycyrrhizin high producing strain	31.394
DRR006526	Leaf Summer glycyrrhizin high producing strain	31.048

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	62.802
SRR2868004	Drought Stress (root)	98.446
SRR2967015	Control (root)	70.972

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	196.111
SRR9715740	Leaf	128.779
SRR9715741	Leaf	272.276
SRR9715739	Root	26.530
SRR9715742	Root	118.056
SRR9715743	Root	100.441

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	162.232
SRR8749028	MeJA induced 9h	160.568
SRR8749029	MeJA induced 9h	163.830
SRR8749030	Uninduced	218.161
SRR8749031	Uninduced	173.388
SRR8749032	Uninduced	146.906

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	48.916
SRR8400027	Control - Root	80.295