Gene detail information of Glyur000019s00002183 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G57500.1 | 2.00E-12 | |
| NR | XP_004493508.1 | 9.39E-39 | PREDICTED: uncharacterized protein LOC101512284 [Cicer arietinum] |
| trEMBL | tr|W9RIY6|W9RIY6_9ROSA | 7.00E-39 | Uncharacterized protein {ECO:0000313|EMBL:EXB93621.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00019 | 574843 | 575178 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.550 |
| SRR1783600 | control | 3.210 |
| SRR1783602 | moderate drought stress | 2.329 |
| SRR1811619 | moderate drought stress | 2.307 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.828 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.877 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.294 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.041 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.772 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.794 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.113 |
| SRR2868004 | Drought Stress (root) | 7.262 |
| SRR2967015 | Control (root) | 8.885 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.307 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.262 |
| SRR9715739 | Root | 0.141 |
| SRR9715742 | Root | 0.842 |
| SRR9715743 | Root | 0.457 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 52.852 |
| SRR8749028 | MeJA induced 9h | 9.251 |
| SRR8749029 | MeJA induced 9h | 30.566 |
| SRR8749030 | Uninduced | 1.145 |
| SRR8749031 | Uninduced | 0.178 |
| SRR8749032 | Uninduced | 3.942 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.380 |
| SRR8400027 | Control - Root | 7.161 |