Gene detail information of Glyur000019s00002171.2 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G41790.1 | 0 | Insulinase (Peptidase family M16) family protein |
| NR | XP_004493496.1 | 0 | PREDICTED: zinc-metallopeptidase, peroxisomal-like isoform X2 [Cicer arietinum] |
| COG | NP_231704.1 | 1.00E-131 | peptidase insulinase family protein [Vibrio cholerae O1 biovar El Tor str. N16961] |
| Swissprot | tr|O22941|PXM16_ARATH | 0 | Zinc-metallopeptidase, peroxisomal |
| trEMBL | tr|K7KEW2|K7KEW2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G29351.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00019 | 514490 | 532236 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01408 | IDE, ide | EC:3.4.24.56 | Alzheimer's disease | map05010 |
| Alzheimer's disease | map05010 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000019s00002171.2 | PF00675.15 | Peptidase_M16 | 31 | 159 | 2.70E-34 |
| Glyur000019s00002171.2 | PF05193.16 | Peptidase_M16_C | 208 | 384 | 3.50E-17 |
| Glyur000019s00002171.2 | PF05193.16 | Peptidase_M16_C | 668 | 843 | 4.80E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.460 |
| SRR1783600 | control | 15.472 |
| SRR1783602 | moderate drought stress | 19.522 |
| SRR1811619 | moderate drought stress | 19.472 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.450 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.228 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.993 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.982 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.514 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.157 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 29.729 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 29.411 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 33.137 |
| SRR2868004 | Drought Stress (root) | 36.868 |
| SRR2967015 | Control (root) | 37.077 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 28.400 |
| SRR9715740 | Leaf | 30.321 |
| SRR9715741 | Leaf | 36.849 |
| SRR9715739 | Root | 1.242 |
| SRR9715742 | Root | 10.910 |
| SRR9715743 | Root | 8.996 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.409 |
| SRR8749028 | MeJA induced 9h | 34.308 |
| SRR8749029 | MeJA induced 9h | 17.934 |
| SRR8749030 | Uninduced | 25.731 |
| SRR8749031 | Uninduced | 26.371 |
| SRR8749032 | Uninduced | 23.008 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 30.487 |
| SRR8400027 | Control - Root | 28.535 |