Gene detail information of Glyur000019s00002159


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G57410.10villin 3
NRXP_004493490.10PREDICTED: villin-2-like isoform X5 [Cicer arietinum]
Swissprottr|O81644|VILI2_ARATH0Villin-2 {ECO:0000303|PubMed:10631247}
trEMBLtr|K7MYB6|K7MYB6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G32010.2}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00019466111475969-


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0007010  cytoskeleton organization

GO:0051017  actin filament bundle assembly


molecular_function

GO:0003779  actin binding

GO:0051015  actin filament binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000019s00002159.1PF00626.17Gelsolin361192.60E-16
Glyur000019s00002159.1PF00626.17Gelsolin1512132.20E-09
Glyur000019s00002159.1PF00626.17Gelsolin2633331.80E-11
Glyur000019s00002159.1PF00626.17Gelsolin4014804.50E-10
Glyur000019s00002159.1PF00626.17Gelsolin5285792.20E-07
Glyur000019s00002159.1PF00626.17Gelsolin6347074.40E-07
Glyur000019s00002159.1PF02209.14VHP9349693.60E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.985
SRR1783600control13.106
SRR1783602moderate drought stress10.518
SRR1811619moderate drought stress10.449

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain27.221
DRR006520Root Summer glycyrrhizin high producing strain26.685
DRR006521Root Winter glycyrrhizin high producing strain15.141
DRR006522Root Winter glycyrrhizin high producing strain14.929
DRR006523Root Summer glycyrrhizin low producing strain25.905
DRR006524Root Summer glycyrrhizin low producing strain25.769
DRR006525Leaf Summer glycyrrhizin high producing strain8.794
DRR006526Leaf Summer glycyrrhizin high producing strain8.701

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)51.763
SRR2868004Drought Stress (root)46.612
SRR2967015Control (root)45.982

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf13.599
SRR9715740Leaf13.825
SRR9715741Leaf17.061
SRR9715739Root2.057
SRR9715742Root16.150
SRR9715743Root14.557

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.659
SRR8749028MeJA induced 9h10.957
SRR8749029MeJA induced 9h3.085
SRR8749030Uninduced4.727
SRR8749031Uninduced3.074
SRR8749032Uninduced2.407

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root33.855
SRR8400027Control - Root35.204

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved