Gene detail information of Glyur000019s00002154 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G41710.3 | 2.00E-60 | Integrase-type DNA-binding superfamily protein |
| NR | XP_004493481.1 | 0 | PREDICTED: AP2-like ethylene-responsive transcription factor At2g41710-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q8GWK2|AP2L4_ARATH | 2.00E-85 | AP2-like ethylene-responsive transcription factor At2g41710 |
| trEMBL | tr|V7CXU8|V7CXU8_PHAVU | 7.00E-178 | Uncharacterized protein {ECO:0000313|EMBL:ESW34178.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00019 | 433653 | 437750 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.528 |
| SRR1783600 | control | 10.749 |
| SRR1783602 | moderate drought stress | 21.674 |
| SRR1811619 | moderate drought stress | 22.015 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.472 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.636 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 26.354 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 26.717 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.162 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.006 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.364 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.070 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.256 |
| SRR2868004 | Drought Stress (root) | 13.070 |
| SRR2967015 | Control (root) | 23.751 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.481 |
| SRR9715740 | Leaf | 4.946 |
| SRR9715741 | Leaf | 3.661 |
| SRR9715739 | Root | 1.425 |
| SRR9715742 | Root | 9.803 |
| SRR9715743 | Root | 7.749 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.744 |
| SRR8749028 | MeJA induced 9h | 4.773 |
| SRR8749029 | MeJA induced 9h | 5.904 |
| SRR8749030 | Uninduced | 1.332 |
| SRR8749031 | Uninduced | 2.171 |
| SRR8749032 | Uninduced | 2.142 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.180 |
| SRR8400027 | Control - Root | 14.502 |