Gene detail information of Glyur000019s00002138 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G53750.1 | 7.00E-26 | regulatory particle triple-A 1A |
| NR | XP_006493392.1 | 1.31E-30 | PREDICTED: 26S protease regulatory subunit 7-like [Citrus sinensis] |
| Swissprot | tr|O64982|PRS7_PRUPE | 5.00E-32 | 26S protease regulatory subunit 7 |
| trEMBL | tr|I1KHK3|I1KHK3_SOYBN | 3.00E-30 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G05220.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00019 | 319086 | 319697 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.461 |
| SRR1783600 | control | 1.418 |
| SRR1783602 | moderate drought stress | 0.263 |
| SRR1811619 | moderate drought stress | 0.728 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.257 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.349 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.545 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.964 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.089 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.149 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.432 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.635 |
| SRR2868004 | Drought Stress (root) | 4.415 |
| SRR2967015 | Control (root) | 3.796 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.484 |
| SRR9715740 | Leaf | 2.446 |
| SRR9715741 | Leaf | 0.387 |
| SRR9715739 | Root | 1.461 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.282 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.401 |
| SRR8400027 | Control - Root | 2.018 |