Gene detail information of Glyur000019s00002128 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G41600.3 | 4.00E-41 | Mitochondrial glycoprotein family protein |
| NR | XP_003625111.1 | 1.34E-98 | Mitochondrial acidic protein mam33 [Medicago truncatula] |
| trEMBL | tr|G7KSM9|G7KSM9_MEDTR | 5.00E-99 | Uncharacterized protein {ECO:0000313|EMBL:AFK48733.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00019 | 275969 | 278948 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000019s00002128.1 | PF02330.11 | MAM33 | 170 | 225 | 1.00E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.957 |
| SRR1783600 | control | 9.495 |
| SRR1783602 | moderate drought stress | 10.203 |
| SRR1811619 | moderate drought stress | 9.668 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.214 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.831 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.896 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.585 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.048 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.781 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.676 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.730 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.577 |
| SRR2868004 | Drought Stress (root) | 15.793 |
| SRR2967015 | Control (root) | 13.874 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.512 |
| SRR9715740 | Leaf | 10.060 |
| SRR9715741 | Leaf | 6.768 |
| SRR9715739 | Root | 5.364 |
| SRR9715742 | Root | 5.540 |
| SRR9715743 | Root | 5.210 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.661 |
| SRR8749028 | MeJA induced 9h | 8.581 |
| SRR8749029 | MeJA induced 9h | 10.127 |
| SRR8749030 | Uninduced | 14.605 |
| SRR8749031 | Uninduced | 10.462 |
| SRR8749032 | Uninduced | 10.797 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.017 |
| SRR8400027 | Control - Root | 14.456 |