Gene detail information of Glyur000019s00002127 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G10290.1 | 1.00E-127 | Nucleotide-sugar transporter family protein |
| NR | XP_007162162.1 | 0 | hypothetical protein PHAVU_001G129500g [Phaseolus vulgaris] |
| Swissprot | tr|Q9FYE5|PT504_ARATH | 3.00E-169 | Probable sugar phosphate/phosphate translocator At5g04160 |
| trEMBL | tr|V7CZ39|V7CZ39_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW34156.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00019 | 271620 | 275124 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000019s00002127.1 | PF03151.11 | TPT | 162 | 294 | 6.80E-19 |
| Glyur000019s00002127.2 | PF03151.11 | TPT | 152 | 258 | 1.40E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.108 |
| SRR1783600 | control | 0.177 |
| SRR1783602 | moderate drought stress | 4.757 |
| SRR1811619 | moderate drought stress | 4.508 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.514 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.929 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.437 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.328 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.022 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.276 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.783 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.726 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.203 |
| SRR2868004 | Drought Stress (root) | 9.573 |
| SRR2967015 | Control (root) | 6.903 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.819 |
| SRR9715740 | Leaf | 5.647 |
| SRR9715741 | Leaf | 12.240 |
| SRR9715739 | Root | 9.295 |
| SRR9715742 | Root | 8.277 |
| SRR9715743 | Root | 8.826 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.814 |
| SRR8400027 | Control - Root | 19.758 |