Gene detail information of Glyur000019s00002125 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007162160.1 | 0 | hypothetical protein PHAVU_001G129400g [Phaseolus vulgaris] |
| trEMBL | tr|V7CY13|V7CY13_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW34155.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00019 | 264283 | 269178 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000019s00002125.1 | PF07498.7 | Rho_N | 587 | 622 | 6.30E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.194 |
| SRR1783600 | control | 2.191 |
| SRR1783602 | moderate drought stress | 3.291 |
| SRR1811619 | moderate drought stress | 3.261 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.710 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.671 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.772 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.766 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.492 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.314 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.264 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.323 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.719 |
| SRR2868004 | Drought Stress (root) | 2.809 |
| SRR2967015 | Control (root) | 2.309 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.813 |
| SRR9715740 | Leaf | 1.953 |
| SRR9715741 | Leaf | 2.041 |
| SRR9715739 | Root | 0.233 |
| SRR9715742 | Root | 1.982 |
| SRR9715743 | Root | 2.245 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.716 |
| SRR8749028 | MeJA induced 9h | 3.447 |
| SRR8749029 | MeJA induced 9h | 2.059 |
| SRR8749030 | Uninduced | 1.532 |
| SRR8749031 | Uninduced | 0.039 |
| SRR8749032 | Uninduced | 0.169 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.518 |
| SRR8400027 | Control - Root | 4.114 |