Gene detail information of Glyur000019s00002110 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G03990.1 | 1.00E-42 | |
| NR | XP_004493446.1 | 4.05E-110 | PREDICTED: uncharacterized protein LOC101491112 [Cicer arietinum] |
| trEMBL | tr|G7KSK5|G7KSK5_MEDTR | 7.00E-105 | Uncharacterized protein {ECO:0000313|EMBL:AES81305.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00019 | 158016 | 161383 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.111 |
| SRR1783600 | control | 4.190 |
| SRR1783602 | moderate drought stress | 3.534 |
| SRR1811619 | moderate drought stress | 3.554 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.399 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.377 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 50.359 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 49.494 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.103 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.347 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.269 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.098 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.680 |
| SRR2868004 | Drought Stress (root) | 3.979 |
| SRR2967015 | Control (root) | 3.582 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.439 |
| SRR9715740 | Leaf | 2.507 |
| SRR9715741 | Leaf | 2.349 |
| SRR9715739 | Root | 0.966 |
| SRR9715742 | Root | 3.161 |
| SRR9715743 | Root | 2.397 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.516 |
| SRR8749028 | MeJA induced 9h | 14.720 |
| SRR8749029 | MeJA induced 9h | 30.405 |
| SRR8749030 | Uninduced | 13.647 |
| SRR8749031 | Uninduced | 23.584 |
| SRR8749032 | Uninduced | 20.145 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.939 |
| SRR8400027 | Control - Root | 4.695 |